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Base-pair collective (covariation) scores

5 rows where conformation = "tHS" and group_code = "B" sorted by position_1

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Suggested facets: reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, PNuc

strength 3

  • Strong 2
  • Weak 2
  • Significant 1

molecule 1

  • 23S 5

group_code 1

  • B · 5 ✖

conformation 1

  • tHS · 5 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3587 3587 23S 5 53 117   v4 A:G tHS   3°: base pair   Significant B 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 2.0 0.0 0.77 252
6751 6751 23S 59 1528 1543   v4 A:G tHS   3°: base pair   Strong B 5 5 3 0.6 0.78 0.94 1.72 0.2 0.23 0.4 0.35 0.0 0.71 264
6975 6975 23S 62 1690 1697   v4 A:G tHS   3°: base pair   Strong B 5 11 2 0.25 0.55 0.89 1.44 0.0 0.0 1.33 0.9 0.0 0.8 262
7150 7150 23S 65 1775 1789   v4 U:A tHS       Weak B 1 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.96 2.0 0.0 0.8 261
7241 7241 23S 66 1803 1814   v4 A:G tHS   3°: base pair   Weak B 0 3 0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 1.85 0.0 0.79 259

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");
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