crw2: basepair_combined: 7 rows where strength = "Significant" and tertiary_type = "3°: pseudoknot" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

7 rows where strength = "Significant" and tertiary_type = "3°: pseudoknot" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CC	CU	GA	GG	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	T	7.8	3.0	0.5	13.6	0.1	0.1	23.2	4.6	0.7	0.3	0.3	0.4	0.3	0.5	44.5	740	GC,CG,AU,AA,AC	GC,CG,AA,UU	23	25	11	0.46	0.35	0.62	0.97	0.45	0.46	-0.16	-0.86	0.12	0.39
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	3	14.1	5.1	0.7	22.1		0.2	29.0						0.2		28.4	411	GC,CG,AU,AA	GC,CG,AA	15	11	8	0.61	0.45	0.67	1.12	0.59	0.59	0.89	-0.72	0.19	0.47
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	B	22.6	8.2	0.8	35.4		0.4	32.3						0.4			257	GC,CG,AU,AA	GC,CG,UA,AU	11	11	8	0.73	0.49	0.67	1.16	0.67	0.67	0.76	0.15	0.0	0.79
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	A							100.0									36	AA		0	0	0	0.0	0.0	0.0	0.0	0.0	0.0	2.0	2.0	0.0	0.88
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	C				5.2			54.2	34.4	1.0				1.0	1.0	3.1	96	AU,AA,AC	AA,GG,UU	2	8	1	0.2	0.05	0.0	0.05	0.05	0.05	1.57	0.66	0.03	0.9
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	E			0.8												99.1	118			4	0	0	0.0	0.0	0.0	0.0	1.0	1.0	1.04	-0.05	0.45	0.0
23S	6.1	64	90	A:U	cWW	3°: pseudoknot	Significant	M		0.4	0.4	2.1	0.4		0.4	0.4	1.7	0.9	0.9	1.3		1.3	89.7	233	AU	AU,CC,GA	6	6	2	0.33	0.26	0.42	0.68	0.29	0.33	-0.57	-0.5	0.03	0.08

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

7 rows where strength = "Significant" and tertiary_type = "3°: pseudoknot" sorted by position_1

Advanced export