crw2: basepair_combined: 31 rows where conformation = "No BP" and group_code = "B" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

31 rows where conformation = "No BP" and group_code = "B" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	1	13	21	U:G	No BP		Weak	B			0.2			98.9			0.2					0.1		0.1	0.1	2128	UG		4	6	1	0.2	0.05	0.0	0.05	0.0	0.99	1.94	1.89	0.0	0.36
16S	15	375	388	U:G	No BP		Weak	B			0.3			98.8			0.1						0.2	0.5		4613	UG		2	17	0	0.0	0.0	0.0	0.0	0.0	0.99	1.97	1.89	0.0	0.79
16S	20	582	758	C:C	No BP	3°: base pair	Strong	B	0.1	11.2	2.6			68.4		0.1		0.2	15.6	0.8			0.6	0.3		4697	CG,UA,UG,CC	UG,CC	54	47	17	0.34	0.5	0.84	1.34	0.14	0.82	1.11	1.08	0.0	0.8
16S	21	606	632	G:U	No BP		Weak	B	2.2	1.0	1.0	2.3	69.1	1.9	0.4	0.1	0.5		0.5	0.4	2.9	12.1	1.8	2.0	1.7	4794	GC,AU,GU,GA,GG,UU	GU,UG,AA,CC	64	114	12	0.14	0.1	0.0	0.1	0.07	0.79	1.25	0.72	0.01	0.8
23S	33	687	775	C:G	No BP		Weak	B		99.3								0.4	0.4							282	CG		0	1	0	0.0	0.0	0.0	0.0	0.99	0.99	2.0	1.93	0.0	0.86
23S	33	688	774	U:G	No BP		Significant	B			88.7			9.2									2.1			282	UA,UG,UC		0	4	0	0.0	0.0	0.0	0.0	0.89	0.98	2.0	1.41	0.0	0.86
23S	34	703	729	U:G	No BP		Weak	B		1.8				98.2												282	UG		1	0	0	0.0	0.0	0.0	0.0	0.02	1.0	1.87	2.0	0.0	0.86
16S	30	944	1237	G:C	No BP		No Support	B	99.7																0.1	4162	GC		2	1	0	0.0	0.0	0.0	0.0	1.0	1.0	1.97	1.99	0.0	0.71
16S	31	960	975	U:A	No BP		Weak	B			92.1			7.5											0.2	4347	UA,UG		1	10	0	0.0	0.0	0.0	0.0	0.92	1.0	1.97	1.59	0.0	0.74
16S	31	961	974	U:A	No BP		Weak	B	0.1		86.4			0.3					0.1				11.3	1.2	0.4	4330	UA,UC	GC,UA	1	28	0	0.0	0.01	0.0	0.01	0.87	0.87	1.95	1.32	0.0	0.74
16S	34	1053	1205	G:U	No BP		Weak	B	3.8				95.6							0.2					0.2	4383	GC,GU		2	12	0	0.0	0.01	0.0	0.01	0.04	1.0	1.95	1.75	0.0	0.75
16S	34	1064	1192	G:C	No BP		Strong	B	97.1				2.1			0.1					0.1	0.6				4404	GC,GU		2	24	1	0.08	0.0	0.0	0.0	0.97	0.99	1.99	1.78	0.0	0.75
16S	40	1158	1178	C:G	No BP		Weak	B		99.8																4605	CG		1	1	0	0.0	0.0	0.0	0.0	1.0	1.0	1.98	1.99	0.0	0.79
16S	40	1159	1177	U:G	No BP		Weak	B		5.7	0.1			93.5			0.5								0.1	4600	CG,UG		43	2	1	0.04	0.0	0.0	0.0	0.06	0.99	1.63	1.97	0.0	0.78
23S	55	1420	1578	A:U	No BP		Strong	B				11.4	0.4	0.8			1.5			2.3				72.3	11.5	264	AU,CU,UU	AG,UU	13	7	0	0.0	0.09	0.0	0.09	0.13	0.14	0.55	1.05	0.03	0.72
16S	45	1506	1529	U:G	No BP		Weak	B			0.3			98.1					0.1			0.4	0.7	0.3	0.1	718	UG	UG,CC	3	5	0	0.0	0.08	0.0	0.08	0.0	0.98	1.92	1.86	0.0	0.12
23S	59	1527	1544	G:A	No BP	3°: base pair	Strong	B	3.4	13.6	5.7	0.4	2.7		1.5						62.1			0.8	9.9	264	GC,CG,UA,GU,GA	CG,GA,UU	9	3	1	0.17	0.51	0.85	1.36	0.26	0.29	0.36	0.4	0.0	0.73
23S	66	1799	1820	G:U	No BP		Weak	B					100.0													262	GU		0	0	0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	2.0	0.0	0.8
23S	69	1911	1919	U:A	No BP		Weak	B			98.0							1.6							0.4	244	UA		2	0	0	0.0	0.0	0.0	0.0	0.98	0.98	1.83	1.95	0.0	0.74
23S	71	1935	1962	G:C	No BP		Strong	B	99.6					0.4												240	GC	GC,UG	1	1	1	1.0	1.0	1.0	2.0	1.0	1.0	1.96	1.91	0.0	0.74
23S	74	2075	2434	U:A	No BP		Weak	B			100.0															241	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.74
23S	76.1	2112	2169	G:A	No BP	3°: pseudoknot	Strong	B									34.4				65.6					241	AG,GA	AG,GA	2	2	2	1.0	1.0	1.0	2.0	0.0	0.0	1.07	1.07	0.0	0.74
23S	76.1	2113	2170	U:A	No BP	3°: pseudoknot	Strong	B		41.9	53.9							1.7			2.5					241	CG,UA,GA	CG,UA	7	5	5	0.83	0.91	0.96	1.87	0.96	0.96	0.86	1.02	0.0	0.74
23S	76.1	2117	2172	A:U	No BP	3°: pseudoknot	Strong	B				100.0														241	AU		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.74
23S	80	2249	2255	U:G	No BP		Weak	B						99.6											0.4	238	UG		0	0	0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	1.95	0.0	0.73
23S	84	2296	2322	U:A	No BP		Strong	B			96.7												2.5	0.8		241	UA,UC		0	3	0	0.0	0.0	0.0	0.0	0.97	0.97	1.95	1.76	0.0	0.74
23S	90	2511	2577	U:A	No BP		No Support	B			100.0															241	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.74
23S	94	2637	2781	U:A	No BP		Strong	B			99.5			0.5												213	UA		0	1	0	0.0	0.0	0.0	0.0	0.99	1.0	2.0	1.96	0.0	0.65
23S	98	2796	2800	U:A	No BP		Strong	B		1.4	12.4	0.9		0.5				2.8						0.5	81.7	218	UA,CA	CG,UA,AU	5	5	1	0.2	0.39	0.8	1.19	0.8	0.82	-0.52	-0.47	0.01	0.12
23S	99	2808	2891	G:U	No BP	3°: base pair	???	B			63.1	10.8	19.7	3.9							0.5				2.0	203	UA,AU,GU,UG	UA,GU	10	3	0	0.0	0.56	0.84	1.41	0.75	0.99	0.66	0.74	0.0	0.61
23S	101	2849	2866	U:U	No BP	3°: base pair	Strong	B					3.4	1.5			0.5			1.0	1.0	51.7		41.0		205	GU,GG,UU	GG,UU	12	11	7	0.61	0.85	0.93	1.77	0.0	0.05	0.9	0.89	0.0	0.63

Advanced export

JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

31 rows where conformation = "No BP" and group_code = "B" sorted by position_1

Advanced export