Base-pair collective (covariation) scores

13 rows where group_code = "E" and strength = "No Support" sorted by position_1

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Suggested facets: helix_number, reference_base_pair, tertiary_type, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, PNuc, Seq

molecule 2

conformation 2

strength 1

  • No Support · 13 ✖

group_code 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1217 1217 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.99 1.99 0.0 0.95 1001
4535 4535 23S 25.1 566 575   v4 U:A cWW       No Support E 0 1 0 0.0 0.0 0.0 0.0 0.99 1.0 2.0 1.96 0.0 0.79 207
2022 2022 16S 28 924 1392   v4 C:G cWW       No Support E 1 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.98 1.96 0.0 0.92 973
2134 2134 16S 30 944 1237   v4 G:C No BP       No Support E 0 0 0 0.0 0.5 1.0 1.5 1.0 1.0 1.92 1.98 0.01 0.92 972
2239 2239 16S 31 963 972   v4 G:C cWW       No Support E 2 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.94 2.0 0.0 0.95 1006
2505 2505 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support E 0 3 0 0.0 0.0 0.0 0.0 0.99 1.0 1.97 1.96 0.0 0.94 998
6145 6145 23S 49.1 1310 1604   v4 G:C cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 0.99 0.99 1.89 1.93 0.0 0.61 161
7692 7692 23S 74 2064 2446   v4 C:G cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.54 143
7755 7755 23S 74 2074 2435   v4 U:A cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.59 155
8665 8665 23S 90 2508 2580   v4 G:U cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.51 135
8686 8686 23S 90 2511 2577   v4 U:A No BP       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.51 135
8847 8847 23S 93 2591 2603   v4 C:G cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.92 1.92 0.0 0.52 139
9386 9386 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support E 6 7 3 0.46 0.76 0.89 1.64 0.79 0.94 0.32 0.58 0.01 0.33 88

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");