Base-pair collective (covariation) scores

6 rows where conformation = "tSH" and group_code = "T" sorted by position_1

✎ View and edit SQL

This data as json, CSV (advanced)

Suggested facets: reference_base_pair, Xch, Cov3, WCGU, XCons, DfDel

strength 3

molecule 2

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3718 3718 23S 7 82 104   v4 U:A tSH       Strong T 24 27 9 0.35 0.51 0.82 1.33 0.09 0.75 -0.57 -0.66 0.08 0.4 745
3928 3928 23S 11 195 200   v4 A:U tSH       Strong T 4 5 3 0.67 0.59 0.99 1.58 0.99 0.99 1.69 1.66 0.0 0.79 840
1695 1695 16S 23 690 697   v4 G:U tSH       Weak T 103 33 7 0.1 0.28 0.87 1.15 0.12 0.94 1.05 1.41 0.0 0.84 7180
6931 6931 23S 61 1667 1993   v4 G:U tSH       Significant T 4 6 2 0.4 0.5 0.99 1.49 0.02 0.99 1.81 1.87 0.0 0.77 807
8100 8100 23S 78 2144 2147   v4 G:A tSH       Strong T 27 21 14 0.58 0.76 0.89 1.65 0.07 0.43 -0.57 -0.49 0.0 0.51 848
9199 9199 23S 97 2746 2758   v4 U:A tSH       Strong T 8 11 6 0.63 0.37 0.97 1.35 0.97 0.98 1.67 1.57 0.0 0.66 697

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");