Base-pair collective (covariation) scores
5 rows where conformation = "tHS" and group_code = "A" sorted by position_1
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Suggested facets: reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, PNuc, Seq
strength 3
- Strong 2
- Weak 2
- Significant 1
molecule 1
- 23S 5
group_code 1
- A · 5 ✖
conformation 1
- tHS · 5 ✖
| Link | rowid | molecule | helix_number | position_1 ▼ | position_2 | pair_note | header_format | reference_base_pair | conformation | ai_code | tertiary_type | header_extra | strength | group_code | Xch | Ych | PE | PES | Cov1 | Cov3 | C1+C3 | WC | WCGU | XCons | YCons | DfDel | PNuc | Seq |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3588 | 3588 | 23S | 5 | 53 | 117 | v4 | A:G | tHS | 3°: base pair | Significant | A | 1 | 1 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.17 | 0.17 | 1.69 | 1.5 | 0.0 | 0.88 | 36 | |||
| 6752 | 6752 | 23S | 59 | 1528 | 1543 | v4 | A:G | tHS | 3°: base pair | Strong | A | 2 | 3 | 3 | 1.0 | 0.8 | 0.97 | 1.77 | 0.97 | 1.0 | 0.17 | 0.03 | 0.0 | 0.71 | 39 | |||
| 6976 | 6976 | 23S | 62 | 1690 | 1697 | v4 | A:G | tHS | 3°: base pair | Strong | A | 4 | 4 | 4 | 1.0 | 0.67 | 0.88 | 1.54 | 0.0 | 0.05 | 0.55 | 0.69 | 0.0 | 1.0 | 41 | |||
| 7151 | 7151 | 23S | 65 | 1775 | 1789 | v4 | U:A | tHS | Weak | A | 0 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 2.0 | 2.0 | 0.0 | 1.0 | 41 | ||||
| 7242 | 7242 | 23S | 66 | 1803 | 1814 | v4 | A:G | tHS | 3°: base pair | Weak | A | 2 | 1 | 0 | 0.0 | 0.7 | 0.93 | 1.63 | 0.0 | 0.76 | 0.92 | 1.29 | 0.0 | 1.0 | 41 |
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CREATE TABLE "basepair_collective_score" (
"molecule" TEXT,
"helix_number" TEXT,
"position_1" INTEGER,
"position_2" INTEGER,
"pair_note" TEXT,
"header_format" TEXT,
"reference_base_pair" TEXT,
"conformation" TEXT,
"ai_code" TEXT,
"tertiary_type" TEXT,
"header_extra" TEXT,
"strength" TEXT,
"group_code" TEXT,
"Xch" INTEGER,
"Ych" INTEGER,
"PE" INTEGER,
"PES" REAL,
"Cov1" REAL,
"Cov3" REAL,
"C1+C3" REAL,
"WC" REAL,
"WCGU" REAL,
"XCons" REAL,
"YCons" REAL,
"DfDel" REAL,
"PNuc" REAL,
"Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
ON "basepair_collective_score" ("molecule", "position_1", "position_2");