Base-pair collective (covariation) scores

77 rows where conformation = "cWW" and strength = "No Support" sorted by position_1

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Suggested facets: helix_number, position_1, position_2, reference_base_pair, tertiary_type, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, DfDel

group_code 7

  • 3 11
  • A 11
  • B 11
  • C 11
  • E 11
  • M 11
  • T 11

molecule 2

strength 1

  • No Support · 77 ✖

conformation 1

  • cWW · 77 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1212 1212 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support T 3 5 0 0.0 0.04 0.0 0.04 1.0 1.0 1.96 1.96 0.0 0.77 6570
1213 1213 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support 3 3 4 0 0.0 0.05 0.0 0.05 1.0 1.0 1.97 1.96 0.0 0.78 5577
1214 1214 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support B 3 3 0 0.0 0.06 0.0 0.06 1.0 1.0 1.96 1.95 0.0 0.74 4373
1215 1215 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support A 0 1 0 0.0 0.0 0.0 0.0 0.99 0.99 2.0 1.96 0.0 0.77 203
1216 1216 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support C 0 1 0 0.0 0.0 0.0 0.0 0.99 0.99 1.95 2.0 0.0 0.93 170
1217 1217 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.99 1.99 0.0 0.95 1001
1218 1218 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support M 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.96 0.0 0.72 831
4530 4530 23S 25.1 566 575   v4 U:A cWW       No Support T 0 1 0 0.0 0.0 0.0 0.0 1.0 1.0 1.88 1.87 0.0 0.84 887
4531 4531 23S 25.1 566 575   v4 U:A cWW       No Support 3 0 1 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.98 0.0 0.83 525
4532 4532 23S 25.1 566 575   v4 U:A cWW       No Support B 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.86 281
4533 4533 23S 25.1 566 575   v4 U:A cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.9 37
4534 4534 23S 25.1 566 575   v4 U:A cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.97 100
4535 4535 23S 25.1 566 575   v4 U:A cWW       No Support E 0 1 0 0.0 0.0 0.0 0.0 0.99 1.0 2.0 1.96 0.0 0.79 207
4536 4536 23S 25.1 566 575   v4 U:A cWW       No Support M 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.67 1.67 0.0 0.8 262
2017 2017 16S 28 924 1392   v4 C:G cWW       No Support T 14 9 3 0.26 0.07 0.0 0.07 0.99 1.0 1.94 1.96 0.0 0.7 5980
2018 2018 16S 28 924 1392   v4 C:G cWW       No Support 3 5 3 0 0.0 0.0 0.0 0.0 1.0 1.0 1.96 1.97 0.0 0.69 4928
2019 2019 16S 28 924 1392   v4 C:G cWW       No Support B 4 3 0 0.0 0.0 0.0 0.0 1.0 1.0 1.96 1.97 0.0 0.65 3785
2020 2020 16S 28 924 1392   v4 C:G cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.93 2.0 0.0 0.64 169
2021 2021 16S 28 924 1392   v4 C:G cWW       No Support C 0 2 0 0.0 0.0 0.0 0.0 0.99 0.99 2.0 1.95 0.0 0.85 154
2022 2022 16S 28 924 1392   v4 C:G cWW       No Support E 1 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.98 1.96 0.0 0.92 973
2023 2023 16S 28 924 1392   v4 C:G cWW       No Support M 9 4 3 0.46 0.13 0.0 0.13 0.99 0.99 1.9 1.95 0.0 0.78 899
2234 2234 16S 31 963 972   v4 G:C cWW       No Support T 5 4 1 0.22 0.13 0.0 0.13 1.0 1.0 1.96 1.96 0.0 0.8 6866
2235 2235 16S 31 963 972   v4 G:C cWW       No Support 3 5 3 0 0.0 0.14 0.0 0.14 1.0 1.0 1.96 1.97 0.0 0.77 5549
2236 2236 16S 31 963 972   v4 G:C cWW       No Support B 3 3 1 0.33 0.18 0.0 0.18 1.0 1.0 1.96 1.96 0.0 0.74 4342
2237 2237 16S 31 963 972   v4 G:C cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.76 201
2238 2238 16S 31 963 972   v4 G:C cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.9 163
2239 2239 16S 31 963 972   v4 G:C cWW       No Support E 2 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.94 2.0 0.0 0.95 1006
2240 2240 16S 31 963 972   v4 G:C cWW       No Support M 0 1 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.99 0.0 0.99 1153
2500 2500 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support T 7 21 2 0.14 0.74 0.98 1.72 0.98 1.0 1.64 1.56 0.0 0.79 6774
2501 2501 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support 3 2 16 1 0.11 0.1 0.0 0.1 0.97 1.0 1.95 1.79 0.0 0.76 5466
2502 2502 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support B 1 11 0 0.0 0.0 0.0 0.0 0.99 1.0 1.98 1.94 0.0 0.73 4267
2503 2503 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support A 1 2 1 0.67 0.0 0.0 0.0 0.44 1.0 1.62 1.01 0.0 0.74 197
2504 2504 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.94 0.01 0.89 162
2505 2505 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support E 0 3 0 0.0 0.0 0.0 0.0 0.99 1.0 1.97 1.96 0.0 0.94 998
2506 2506 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support M 5 5 1 0.2 0.98 0.99 1.98 0.99 1.0 1.03 1.04 0.0 0.99 1151
6140 6140 23S 49.1 1310 1604   v4 G:C cWW       No Support T 10 2 0 0.0 0.25 0.99 1.25 0.99 0.99 0.61 0.57 0.17 0.58 839
6141 6141 23S 49.1 1310 1604   v4 G:C cWW       No Support 3 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.95 1.97 0.0 0.73 464
6142 6142 23S 49.1 1310 1604   v4 G:C cWW       No Support B 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.8 262
6143 6143 23S 49.1 1310 1604   v4 G:C cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
6144 6144 23S 49.1 1310 1604   v4 G:C cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.97 100
6145 6145 23S 49.1 1310 1604   v4 G:C cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 0.99 0.99 1.89 1.93 0.0 0.61 161
6146 6146 23S 49.1 1310 1604   v4 G:C cWW       No Support M 10 2 0 0.0 0.33 0.96 1.29 0.94 0.94 -0.34 -0.42 0.56 0.15 275
7687 7687 23S 74 2064 2446   v4 C:G cWW       No Support T 1 1 1 1.0 0.71 1.0 1.71 1.0 1.0 1.92 1.93 0.0 0.79 831
7688 7688 23S 74 2064 2446   v4 C:G cWW       No Support 3 0 0 0 0.0 0.0 0.0 0.0 0.99 1.0 1.96 1.97 0.0 0.67 423
7689 7689 23S 74 2064 2446   v4 C:G cWW       No Support B 0 0 0 0.0 0.0 0.0 0.0 0.99 1.0 1.93 1.95 0.0 0.73 239
7690 7690 23S 74 2064 2446   v4 C:G cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
7691 7691 23S 74 2064 2446   v4 C:G cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.96 99
7692 7692 23S 74 2064 2446   v4 C:G cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.54 143
7693 7693 23S 74 2064 2446   v4 C:G cWW       No Support M 1 1 1 1.0 1.0 1.0 2.0 1.0 1.0 1.84 1.88 0.0 0.99 309
7750 7750 23S 74 2074 2435   v4 U:A cWW       No Support T 1 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.97 1.95 0.0 0.81 845
7751 7751 23S 74 2074 2435   v4 U:A cWW       No Support 3 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.91 0.01 0.69 437
7752 7752 23S 74 2074 2435   v4 U:A cWW       No Support B 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.84 0.01 0.73 241
7753 7753 23S 74 2074 2435   v4 U:A cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
7754 7754 23S 74 2074 2435   v4 U:A cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.96 99
7755 7755 23S 74 2074 2435   v4 U:A cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.59 155
7756 7756 23S 74 2074 2435   v4 U:A cWW       No Support M 1 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.93 2.0 0.0 0.99 309
8660 8660 23S 90 2508 2580   v4 G:U cWW       No Support T 1 0 0 0.0 0.0 0.0 0.0 0.0 0.99 1.91 2.0 0.0 0.74 778
8661 8661 23S 90 2508 2580   v4 G:U cWW       No Support 3 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.66 418
8662 8662 23S 90 2508 2580   v4 G:U cWW       No Support B 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 1.95 2.0 0.0 0.74 242
8663 8663 23S 90 2508 2580   v4 G:U cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 1.0 41
8664 8664 23S 90 2508 2580   v4 G:U cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.94 97
8665 8665 23S 90 2508 2580   v4 G:U cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.51 135
8666 8666 23S 90 2508 2580   v4 G:U cWW       No Support M 1 0 0 0.0 0.0 0.0 0.0 0.0 0.97 1.81 2.0 0.0 0.84 263
8842 8842 23S 93 2591 2603   v4 C:G cWW       No Support T 2 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.96 1.97 0.0 0.7 734
8843 8843 23S 93 2591 2603   v4 C:G cWW       No Support 3 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.97 1.95 0.0 0.66 417
8844 8844 23S 93 2591 2603   v4 C:G cWW       No Support B 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.73 237
8845 8845 23S 93 2591 2603   v4 C:G cWW       No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
8846 8846 23S 93 2591 2603   v4 C:G cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.53 55
8847 8847 23S 93 2591 2603   v4 C:G cWW       No Support E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.92 1.92 0.0 0.52 139
8848 8848 23S 93 2591 2603   v4 C:G cWW       No Support M 2 0 0 0.0 0.0 0.0 0.0 0.99 1.0 1.93 2.0 0.0 0.84 262
9381 9381 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support T 34 30 13 0.41 0.35 0.51 0.86 0.47 0.68 0.09 0.44 0.0 0.4 426
9382 9382 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support 3 21 19 10 0.5 0.4 0.58 0.98 0.41 0.63 0.19 0.71 0.01 0.52 331
9383 9383 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support B 15 12 7 0.52 0.32 0.63 0.94 0.14 0.43 0.36 1.07 0.0 0.63 205
9384 9384 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.93 38
9385 9385 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support C 4 3 0 0.0 0.59 0.76 1.35 0.76 0.94 0.53 0.75 0.0 0.48 50
9386 9386 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support E 6 7 3 0.46 0.76 0.89 1.64 0.79 0.94 0.32 0.58 0.01 0.33 88
9387 9387 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support M 9 8 3 0.35 0.52 0.68 1.2 0.62 0.78 -0.43 -0.35 0.0 0.12 45

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");