Base-pair collective (covariation) scores
7 rows where conformation = "cWH" and molecule = "23S" sorted by position_1
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Suggested facets: Xch, PE, WCGU, XCons, DfDel
| Link | rowid | molecule | helix_number | position_1 ▼ | position_2 | pair_note | header_format | reference_base_pair | conformation | ai_code | tertiary_type | header_extra | strength | group_code | Xch | Ych | PE | PES | Cov1 | Cov3 | C1+C3 | WC | WCGU | XCons | YCons | DfDel | PNuc | Seq |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3669 | 3669 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | T | 33 | 37 | 15 | 0.43 | 0.48 | 0.73 | 1.21 | 0.73 | 0.82 | -0.45 | -0.59 | 0.0 | 0.52 | 740 | |||
| 3670 | 3670 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | 3 | 17 | 20 | 6 | 0.32 | 0.34 | 0.74 | 1.08 | 0.74 | 0.82 | 0.84 | 0.45 | 0.0 | 0.64 | 411 | |||
| 3671 | 3671 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | B | 8 | 10 | 3 | 0.33 | 0.58 | 0.88 | 1.46 | 0.88 | 0.95 | 0.84 | 0.9 | 0.0 | 0.78 | 256 | |||
| 3672 | 3672 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | A | 2 | 2 | 1 | 0.5 | 0.5 | 0.89 | 1.39 | 0.89 | 1.0 | 0.8 | 1.06 | 0.02 | 0.85 | 36 | |||
| 3673 | 3673 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | C | 8 | 11 | 7 | 0.74 | 0.4 | 0.78 | 1.18 | 0.78 | 0.98 | 1.18 | 0.73 | 0.0 | 0.93 | 96 | |||
| 3674 | 3674 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | E | 7 | 8 | 2 | 0.27 | 0.11 | 0.0 | 0.11 | 0.39 | 0.48 | 0.97 | 0.16 | 0.01 | 0.44 | 119 | |||
| 3675 | 3675 | 23S | 6.2 | 67 | 74 | v4 | U:A | cWH | 3°: pseudoknot | Strong | M | 8 | 6 | 2 | 0.29 | 0.33 | 0.46 | 0.79 | 0.43 | 0.46 | -0.61 | -0.62 | 0.0 | 0.12 | 233 |
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CREATE TABLE "basepair_collective_score" (
"molecule" TEXT,
"helix_number" TEXT,
"position_1" INTEGER,
"position_2" INTEGER,
"pair_note" TEXT,
"header_format" TEXT,
"reference_base_pair" TEXT,
"conformation" TEXT,
"ai_code" TEXT,
"tertiary_type" TEXT,
"header_extra" TEXT,
"strength" TEXT,
"group_code" TEXT,
"Xch" INTEGER,
"Ych" INTEGER,
"PE" INTEGER,
"PES" REAL,
"Cov1" REAL,
"Cov3" REAL,
"C1+C3" REAL,
"WC" REAL,
"WCGU" REAL,
"XCons" REAL,
"YCons" REAL,
"DfDel" REAL,
"PNuc" REAL,
"Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
ON "basepair_collective_score" ("molecule", "position_1", "position_2");