crw2: basepair_frequency: 47 rows where group_code = "C", molecule = "16S" and strength = "Weak" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
header_format: legacy = entry not yet revised to the v4 layout (no type / conformation).

47 rows where group_code = "C", molecule = "16S" and strength = "Weak" sorted by position_1

descending

Link	rowid	molecule	helix_number	position_1 ▼	position_2	header_format	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	Seq	predominant_types	covarying_types
201	201	16S	1	13	21	v4	U:G	No BP		Weak	C			0.8			94.4										4.8		126	UG,UU
278	278	16S	3	35	549	v4	G:C	cWW		Weak	C	86.8				13.2													136	GC,GU
292	292	16S	3	37	547	v4	U:A	tWS		Weak	C			96.7				1.3			0.7			0.7				0.7	152	UA
299	299	16S	4	39	403	v4	G:C	cWW		Weak	C	98.1			0.6	0.6										0.6			154	GC	GC,AU
376	376	16S	5	54	357	v4	C:G	cWW		Weak	C		100.0																158	CG
383	383	16S	5	56	356	v4	U:A	cWW		Weak	C			100.0															158	UA
397	397	16S	5	58	354	v4	C:G	cWW		Weak	C		100.0																158	CG
411	411	16S	6	62	105	v4	U:G	cWW		Weak	C						99.4											0.6	162	UG
439	439	16S	6	68	101	v4	G:A	cWW	3°: base pair	Weak	C	1.8		2.4	0.6	0.6								92.7	1.8				164	UA,GA	AU,GA
950	950	16S	12	292	308	v4	G:C	cWW		Weak	C	99.4							0.6										167	GC
1048	1048	16S	14	342	347	v4	C:G	cWW		Weak	C		93.3	1.2			4.2			0.6							0.6		165	CG,UG	CG,UA
1083	1083	16S	15	375	388	v4	U:G	No BP		Weak	C			0.6			99.4												164	UG
1118	1118	16S	16	406	436	v4	G:C	cWW		Weak	C	98.1		0.6										0.6			0.6		162	GC	GC,UA
1146	1146	16S	16	416	427	v4	G:U	cWW		Weak	C	41.1			6.7	44.2	0.6		1.8								4.9	0.6	163	GC,AU,GU,UU	GU,UG,AC
1167	1167	16S	16	419	424	v4	C:G	cWW		Weak	C		84.8	2.4	0.6		10.3				0.6	0.6						0.6	165	CG,UA,UG	CG,UA,AU
1426	1426	16S	19.1	571	865	v4	U:A	cWW	3°: pseudoknot	Weak	C			98.8													0.6	0.6	162	UA
1475	1475	16S	20	584	757	v4	G:U	cWW		Weak	C	0.6			0.6	98.8													165	GU
1538	1538	16S	21	594	645	v4	U:G	cWW		Weak	C	0.6	7.1	49.7	9.5		14.8	3.0	4.1		9.5					0.6	1.2		169	CG,UA,AU,UG,AA,AC,CA	GC,CG,UA,AU
1552	1552	16S	21	597	643	v4	G:C	cWW		Weak	C	91.8		1.8	3.5			0.6	1.8							0.6			170	GC,AU	GC,UA,AU
1608	1608	16S	21	605	633	v4	U:G	cWW		Weak	C			2.9	2.4		90.6	1.2		0.6	0.6						0.6	1.2	170	UA,AU,UG	AU,UG,CA
1615	1615	16S	21	606	632	v4	G:U	No BP		Weak	C	2.4	44.7	27.1	2.4	1.8	12.4	1.2		1.2			0.6			4.1	1.8	0.6	170	GC,CG,UA,AU,UG,UC	GC,CG,UA,AU
1692	1692	16S	22	658	748	v4	C:G	cWW		Weak	C	2.4	0.6	6.0	25.6	2.4	0.6	9.5	31.0	1.2			3.0	7.7	3.0		7.1		168	GC,UA,AU,GU,AA,AC,CU,GA,GG,UU	CG,AC,GA,UU
1734	1734	16S	22	666	740	v4	G:U	cWW		Weak	C				5.4	94.0												0.6	167	AU,GU
1797	1797	16S	23	677	713	v4	U:G	cWW		Weak	C		1.8	75.7			18.9			0.6	1.8						0.6	0.6	169	UA,UG	CG,UA
1846	1846	16S	23	684	706	v4	U:A	cWW		Weak	C			86.9	1.8	0.6		7.1					3.6						168	UA,AA,CU	UA,CU
1867	1867	16S	23	690	697	v4	G:U	tSH		Weak	C				10.1	88.8		0.6										0.6	169	AU,GU	GU,AA
2042	2042	16S	26	832	854	v4	G:U	cWW		Weak	C	1.8	0.6		14.6	80.5	0.6						0.6				0.6	0.6	164	AU,GU	CG,GU
2105	2105	16S	26.1	861	868	v4	G:C	cWW		Weak	C	89.6			1.8				1.2			4.9				0.6		1.8	164	GC,CC	GC,AU
2196	2196	16S	28	925	1391	v4	G:U	cWW		Weak	C	0.6				99.4													154	GU
2252	2252	16S	28	935	1380	v4	A:U	cWW		Weak	C				97.4	0.6		0.6		0.6								0.6	154	AU
2287	2287	16S	29	942	1341	v4	G:U	cWW		Weak	C				1.9	91.2			1.9								1.2	3.8	160	GU	GU,AC
2343	2343	16S	30	950	1231	v4	U:G	cWW		Weak	C		1.9	1.9			95.0											1.2	160	UG
2385	2385	16S	31	960	975	v4	U:A	No BP		Weak	C			96.9													3.1		162	UA,UU
2392	2392	16S	31	961	974	v4	U:A	No BP		Weak	C			96.9							2.5						0.6		163	UA,CA
2623	2623	16S	34	1052	1206	v4	U:G	cWW		Weak	C						100.0												163	UG
2630	2630	16S	34	1053	1205	v4	G:U	No BP		Weak	C	0.6				99.4													163	GU
2651	2651	16S	34	1058	1199	v4	G:U	cWW		Weak	C					99.4												0.6	161	GU
2903	2903	16S	40	1158	1178	v4	C:G	No BP		Weak	C		91.0		0.6		3.0	0.6		0.6			0.6					3.6	167	CG,UG	CG,AU
2910	2910	16S	40	1159	1177	v4	U:G	No BP		Weak	C		3.0	0.6	0.6		90.4			1.2	0.6				0.6		0.6	2.4	167	CG,UG	AU,UG,CA
3022	3022	16S	41	1255	1282	v4	G:C	cWW		Weak	C	81.5		4.2	5.4	4.8		3.0								0.6		0.6	168	GC,UA,AU,GU,AA	GC,UA,AU
3190	3190	16S	44	1401	1501	v4	G:C	cWW		Weak	C	100.0																	142	GC
3323	3323	16S	44	1425	1475	v4	U:G	cWW		Weak	C		50.7	26.0	2.0	0.7	15.3	0.7		0.7	2.0			0.7			0.7	0.7	150	CG,UA,AU,UG,CA	CG,UA,AU
3365	3365	16S	44	1435	1466	v4	G:C	cWW		Weak	C	74.3		3.3	6.6			5.9	6.6	0.7			0.7	1.3				0.7	152	GC,UA,AU,AA,AC	GC,UA,AU
3407	3407	16S	44	1442	1460	v4	G:C	cWW		Weak	C	8.4	58.4	14.3		0.6	1.9			0.6	1.3	0.6		2.6	0.6		1.9	8.3	154	GC,CG,UA,GA	GC,CG,UA
3449	3449	16S	45	1506	1529	v4	U:G	No BP		Weak	C						100.0												108	UG
3484	3484	16S	45	1511	1524	v4	G:C	cWW		Weak	C	75.7	1.9			20.4							1.9						103	GC,GU	GC,CG
3491	3491	16S	45	1512	1523	v4	U:G	cWW		Weak	C						100.0												114	UG

Advanced export

JSON shape: default, array, newline-delimited

CREATE TABLE "basepair_frequency" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "GC" REAL,
   "CG" REAL,
   "UA" REAL,
   "AU" REAL,
   "GU" REAL,
   "UG" REAL,
   "AA" REAL,
   "AC" REAL,
   "AG" REAL,
   "CA" REAL,
   "CC" REAL,
   "CU" REAL,
   "GA" REAL,
   "GG" REAL,
   "UC" REAL,
   "UU" REAL,
   "gap" REAL,
   "Seq" INTEGER,
   "predominant_types" TEXT,
   "covarying_types" TEXT
);
CREATE INDEX "idx_basepair_frequency_molecule_position_1_position_2"
    ON "basepair_frequency" ("molecule", "position_1", "position_2");

Base-pair frequencies

47 rows where group_code = "C", molecule = "16S" and strength = "Weak" sorted by position_1

Advanced export