crw2: basepair_frequency: 42 rows where conformation = "No BP", molecule = "23S" and strength = "Weak" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
header_format: legacy = entry not yet revised to the v4 layout (no type / conformation).

42 rows where conformation = "No BP", molecule = "23S" and strength = "Weak" sorted by position_1

descending

Link	rowid	molecule	helix_number	position_1 ▼	position_2	header_format	reference_base_pair	conformation	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	Seq	predominant_types	covarying_types
4992	4992	23S	33	687	775	v4	C:G	No BP	Weak	T		95.8	0.2	0.9		1.2		0.1	0.3	0.1	0.1	0.3	0.1	0.3			0.3	886	CG	CG,UA,AU
4993	4993	23S	33	687	775	v4	C:G	No BP	Weak	3		99.0								0.2	0.2			0.4			0.2	524	CG
4994	4994	23S	33	687	775	v4	C:G	No BP	Weak	B		99.3								0.4	0.4							282	CG
4995	4995	23S	33	687	775	v4	C:G	No BP	Weak	A		100.0																37	CG
4996	4996	23S	33	687	775	v4	C:G	No BP	Weak	C		95.0							2.0			3.0						100	CG,AG,CU
4997	4997	23S	33	687	775	v4	C:G	No BP	Weak	E		98.5												1.0			0.5	205	CG
4998	4998	23S	33	687	775	v4	C:G	No BP	Weak	M		89.7	0.8	3.1		4.2		0.4	0.4				0.4	0.4			0.8	262	CG,AU,UG	CG,UA,AU
5097	5097	23S	34	703	729	v4	U:G	No BP	Weak	T		15.1	0.1	0.1	0.1	71.4	0.2		5.1	0.1		0.1		0.6			7.1	887	CG,UG,AG	GU,UG,AA
5098	5098	23S	34	703	729	v4	U:G	No BP	Weak	3		22.5				77.3				0.2								524	CG,UG	UG,CA
5099	5099	23S	34	703	729	v4	U:G	No BP	Weak	B		1.8				98.2												282	UG
5100	5100	23S	34	703	729	v4	U:G	No BP	Weak	A		32.4				67.6												37	CG,UG
5101	5101	23S	34	703	729	v4	U:G	No BP	Weak	C						100.0												100	UG
5102	5102	23S	34	703	729	v4	U:G	No BP	Weak	E		49.3				50.2				0.5								205	CG,UG	UG,CA
5103	5103	23S	34	703	729	v4	U:G	No BP	Weak	M		6.1	0.4	0.4	0.4	48.7	0.8		17.1			0.4		1.9			24.0	263	CG,UG,AG	GU,UG,AA
7393	7393	23S	66	1799	1820	v4	G:U	No BP	Weak	T	22.1		0.1	0.6	73.2			0.1					0.4				3.5	842	GC,GU	UA,GU,AC
7394	7394	23S	66	1799	1820	v4	G:U	No BP	Weak	3	40.0				58.3			0.2									1.5	458	GC,GU	GU,AC
7395	7395	23S	66	1799	1820	v4	G:U	No BP	Weak	B					100.0													262	GU
7396	7396	23S	66	1799	1820	v4	G:U	No BP	Weak	A	90.2				9.8													41	GC,GU
7397	7397	23S	66	1799	1820	v4	G:U	No BP	Weak	C	1.0				96.0								3.0					101	GU,GA
7398	7398	23S	66	1799	1820	v4	G:U	No BP	Weak	E	97.4				0.6			0.6									1.2	155	GC
7399	7399	23S	66	1799	1820	v4	G:U	No BP	Weak	M	0.7		0.4	1.8	89.0												8.1	283	GU	UA,GU
7666	7666	23S	69	1911	1919	v4	U:A	No BP	Weak	T			97.9							0.5						0.1	1.5	852	UA
7667	7667	23S	69	1911	1919	v4	U:A	No BP	Weak	3			98.6							0.9						0.2	0.2	440	UA
7668	7668	23S	69	1911	1919	v4	U:A	No BP	Weak	B			98.0							1.6							0.4	244	UA
7669	7669	23S	69	1911	1919	v4	U:A	No BP	Weak	A			100.0															41	UA
7670	7670	23S	69	1911	1919	v4	U:A	No BP	Weak	C			100.0															101	UA
7671	7671	23S	69	1911	1919	v4	U:A	No BP	Weak	E			99.4													0.6		155	UA
7672	7672	23S	69	1911	1919	v4	U:A	No BP	Weak	M			96.1														3.8	311	UA
7925	7925	23S	74	2075	2434	v4	U:A	No BP	Weak	T		0.1	97.8			0.4	0.2					0.1			0.2	1.2		845	UA	CG,UA
7926	7926	23S	74	2075	2434	v4	U:A	No BP	Weak	3			99.3													0.7		437	UA
7927	7927	23S	74	2075	2434	v4	U:A	No BP	Weak	B			100.0															241	UA
7928	7928	23S	74	2075	2434	v4	U:A	No BP	Weak	A			100.0															41	UA
7929	7929	23S	74	2075	2434	v4	U:A	No BP	Weak	C			100.0															99	UA
7930	7930	23S	74	2075	2434	v4	U:A	No BP	Weak	E			98.1													1.9		155	UA
7931	7931	23S	74	2075	2434	v4	U:A	No BP	Weak	M		0.3	94.8			1.0	0.6					0.3			0.6	2.3		309	UA,UU	CG,UA
8359	8359	23S	80	2249	2255	v4	U:G	No BP	Weak	T			4.1			94.6				0.6				0.4	0.1	0.1	0.1	845	UA,UG	UG,CA
8360	8360	23S	80	2249	2255	v4	U:G	No BP	Weak	3						99.1								0.7			0.2	434	UG
8361	8361	23S	80	2249	2255	v4	U:G	No BP	Weak	B						99.6											0.4	238	UG
8362	8362	23S	80	2249	2255	v4	U:G	No BP	Weak	A						100.0												41	UG
8363	8363	23S	80	2249	2255	v4	U:G	No BP	Weak	C			2.0			98.0												102	UA,UG
8364	8364	23S	80	2249	2255	v4	U:G	No BP	Weak	E						98.1								1.9				155	UG
8365	8365	23S	80	2249	2255	v4	U:G	No BP	Weak	M			10.7			87.1				1.6					0.3	0.3		309	UA,UG	UG,CA

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JSON shape: default, array, newline-delimited

CREATE TABLE "basepair_frequency" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "GC" REAL,
   "CG" REAL,
   "UA" REAL,
   "AU" REAL,
   "GU" REAL,
   "UG" REAL,
   "AA" REAL,
   "AC" REAL,
   "AG" REAL,
   "CA" REAL,
   "CC" REAL,
   "CU" REAL,
   "GA" REAL,
   "GG" REAL,
   "UC" REAL,
   "UU" REAL,
   "gap" REAL,
   "Seq" INTEGER,
   "predominant_types" TEXT,
   "covarying_types" TEXT
);
CREATE INDEX "idx_basepair_frequency_molecule_position_1_position_2"
    ON "basepair_frequency" ("molecule", "position_1", "position_2");

Base-pair frequencies

42 rows where conformation = "No BP", molecule = "23S" and strength = "Weak" sorted by position_1

Advanced export