crw2: basepair_frequency: 15 rows where conformation = "No BP", group_code = "M" and strength = "Weak" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
header_format: legacy = entry not yet revised to the v4 layout (no type / conformation).

15 rows where conformation = "No BP", group_code = "M" and strength = "Weak" sorted by position_1

descending

Link	rowid	molecule	helix_number	position_1 ▼	position_2	header_format	reference_base_pair	conformation	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	Seq	predominant_types	covarying_types
203	203	16S	1	13	21	v4	U:G	No BP	Weak	M			50.2	0.1		38.6	0.4		8.1	0.7			0.4	0.1		0.6	0.6	669	UA,UG,AG	UA,AG
1085	1085	16S	15	375	388	v4	U:G	No BP	Weak	M	0.2	0.4	5.1			92.9	0.4		0.1					0.2		0.1	0.6	829	UA,UG	GC,UG,AA
1617	1617	16S	21	606	632	v4	G:U	No BP	Weak	M		0.1	0.6	0.2	2.0	0.2	0.4		0.2	0.1			0.1			0.4	95.8	1021	GU	UA,GU,AG
4998	4998	23S	33	687	775	v4	C:G	No BP	Weak	M		89.7	0.8	3.1		4.2		0.4	0.4				0.4	0.4			0.8	262	CG,AU,UG	CG,UA,AU
5103	5103	23S	34	703	729	v4	U:G	No BP	Weak	M		6.1	0.4	0.4	0.4	48.7	0.8		17.1			0.4		1.9			24.0	263	CG,UG,AG	GU,UG,AA
2387	2387	16S	31	960	975	v4	U:A	No BP	Weak	M			6.5	89.1		0.6	0.9	0.3	0.6		0.1	0.3			1.0	0.7	0.1	1153	UA,AU	UA,AU,CC
2394	2394	16S	31	961	974	v4	U:A	No BP	Weak	M	0.6		54.6	0.6	0.4	0.1	1.5	0.1		3.3	0.3	12.3	0.1		8.9	17.3		1151	UA,CA,CU,UC,UU	GC,UA,CU
2632	2632	16S	34	1053	1205	v4	G:U	No BP	Weak	M	0.5			90.9	7.8			0.5				0.1				0.1	0.1	1152	AU,GU	GC,AU
2905	2905	16S	40	1158	1178	v4	C:G	No BP	Weak	M	0.1	2.5	2.3	0.3			0.2		0.1			0.3		0.2		0.4	93.5	1152	CG,UA	GC,CG,UA,AU
2912	2912	16S	40	1159	1177	v4	U:G	No BP	Weak	M		0.3	0.3	0.2	0.1	2.5	0.1		0.1	0.3	2.0	0.2		0.2		0.4	93.6	1152	UG,CC	AU,UG,CC
3451	3451	16S	45	1506	1529	v4	U:G	No BP	Weak	M			15.6			83.0								0.1	0.1	0.9	0.1	672	UA,UG
7399	7399	23S	66	1799	1820	v4	G:U	No BP	Weak	M	0.7		0.4	1.8	89.0												8.1	283	GU	UA,GU
7672	7672	23S	69	1911	1919	v4	U:A	No BP	Weak	M			96.1														3.8	311	UA
7931	7931	23S	74	2075	2434	v4	U:A	No BP	Weak	M		0.3	94.8			1.0	0.6					0.3			0.6	2.3		309	UA,UU	CG,UA
8365	8365	23S	80	2249	2255	v4	U:G	No BP	Weak	M			10.7			87.1				1.6					0.3	0.3		309	UA,UG	UG,CA

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CREATE TABLE "basepair_frequency" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "GC" REAL,
   "CG" REAL,
   "UA" REAL,
   "AU" REAL,
   "GU" REAL,
   "UG" REAL,
   "AA" REAL,
   "AC" REAL,
   "AG" REAL,
   "CA" REAL,
   "CC" REAL,
   "CU" REAL,
   "GA" REAL,
   "GG" REAL,
   "UC" REAL,
   "UU" REAL,
   "gap" REAL,
   "Seq" INTEGER,
   "predominant_types" TEXT,
   "covarying_types" TEXT
);
CREATE INDEX "idx_basepair_frequency_molecule_position_1_position_2"
    ON "basepair_frequency" ("molecule", "position_1", "position_2");

Base-pair frequencies

15 rows where conformation = "No BP", group_code = "M" and strength = "Weak" sorted by position_1

Advanced export