crw2: basepair_frequency: 15 rows where conformation = "No BP", group_code = 3 and strength = "Weak" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
header_format: legacy = entry not yet revised to the v4 layout (no type / conformation).

15 rows where conformation = "No BP", group_code = 3 and strength = "Weak" sorted by position_1

descending

Link	rowid	molecule	helix_number	position_1 ▼	position_2	header_format	reference_base_pair	conformation	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	Seq	predominant_types	covarying_types
198	198	16S	1	13	21	v4	U:G	No BP	Weak	3		0.1	0.2			99.0			0.1					0.1		0.1	0.4	3097	UG
1080	1080	16S	15	375	388	v4	U:G	No BP	Weak	3		0.1	0.4			98.5			0.1						0.1	0.4	0.3	5867	UG
1612	1612	16S	21	606	632	v4	G:U	No BP	Weak	3	2.0	0.8	0.8	1.9	56.4	1.6	0.3	0.1	0.4		0.4	0.3	2.4	9.7	1.5	2.8	18.4	6068	GC,GU,GA,GG,UU	GU,UG,AA,CC
4993	4993	23S	33	687	775	v4	C:G	No BP	Weak	3		99.0								0.2	0.2			0.4			0.2	524	CG
5098	5098	23S	34	703	729	v4	U:G	No BP	Weak	3		22.5				77.3				0.2								524	CG,UG	UG,CA
2382	2382	16S	31	960	975	v4	U:A	No BP	Weak	3			72.2			27.5											0.1	5561	UA,UG
2389	2389	16S	31	961	974	v4	U:A	No BP	Weak	3	0.1	0.1	68.1			20.8					0.2				8.9	1.5	0.3	5546	UA,UG,UC	UA,CC
2627	2627	16S	34	1053	1205	v4	G:U	No BP	Weak	3	3.0			0.1	96.4							0.2					0.3	5581	GC,GU
2900	2900	16S	40	1158	1178	v4	C:G	No BP	Weak	3		96.4				0.5				0.2	2.2	0.1			0.2		0.2	5825	CG,CC	CG,UC
2907	2907	16S	40	1159	1177	v4	U:G	No BP	Weak	3		6.6	0.2	0.1		87.0	1.8	0.4	1.8	0.4		0.1	0.1	0.9	0.1	0.4	0.3	5822	CG,UG	UG,AA,CU
3446	3446	16S	45	1506	1529	v4	U:G	No BP	Weak	3		0.9	0.3			96.7			0.1		0.1			0.2	0.7	0.1	0.9	1484	UG	UG,CC
7394	7394	23S	66	1799	1820	v4	G:U	No BP	Weak	3	40.0				58.3			0.2									1.5	458	GC,GU	GU,AC
7667	7667	23S	69	1911	1919	v4	U:A	No BP	Weak	3			98.6							0.9						0.2	0.2	440	UA
7926	7926	23S	74	2075	2434	v4	U:A	No BP	Weak	3			99.3													0.7		437	UA
8360	8360	23S	80	2249	2255	v4	U:G	No BP	Weak	3						99.1								0.7			0.2	434	UG

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CREATE TABLE "basepair_frequency" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "GC" REAL,
   "CG" REAL,
   "UA" REAL,
   "AU" REAL,
   "GU" REAL,
   "UG" REAL,
   "AA" REAL,
   "AC" REAL,
   "AG" REAL,
   "CA" REAL,
   "CC" REAL,
   "CU" REAL,
   "GA" REAL,
   "GG" REAL,
   "UC" REAL,
   "UU" REAL,
   "gap" REAL,
   "Seq" INTEGER,
   "predominant_types" TEXT,
   "covarying_types" TEXT
);
CREATE INDEX "idx_basepair_frequency_molecule_position_1_position_2"
    ON "basepair_frequency" ("molecule", "position_1", "position_2");

Base-pair frequencies

15 rows where conformation = "No BP", group_code = 3 and strength = "Weak" sorted by position_1

Advanced export