crw2: basepair_combined: 7 rows where conformation = "tHW" and molecule = "16S" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

7 rows where conformation = "tHW" and molecule = "16S" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	8	152	169	A:C	tHW	3°: base pair	Strong	T	0.2		0.4	7.2	0.2	2.5	69.9	0.4	0.1	2.1	0.4	0.7	3.7	0.2	0.1	11.9	7096	GU,AA,AC,CC,GG	GU,UG,AC,CA	98	108	48	0.47	0.41	0.88	1.29	0.01	0.09	0.53	0.41	0.0	0.73
16S	8	152	169	A:C	tHW	3°: base pair	Strong	3	0.2		0.4	8.4	0.3	2.8	78.7	0.4	0.2	2.5	0.5	0.8	4.3	0.3	0.1	0.3	6105	GU,AA,AC,CC,GG	GU,UG,AC,CA	95	103	47	0.47	0.42	0.88	1.3	0.01	0.09	1.15	1.02	0.0	0.85
16S	8	152	169	A:C	tHW	3°: base pair	Strong	B	0.1		0.4	10.5	0.3	1.1	79.6	0.2	0.1	0.6	0.5	0.8	5.4	0.1		0.3	4869	GU,AC,GG	GU,UG,AC,CA	72	84	46	0.59	0.54	0.91	1.45	0.01	0.11	1.2	1.01	0.0	0.83
16S	8	152	169	A:C	tHW	3°: base pair	Strong	A			0.5			47.9	35.8	0.9		11.2	2.3				1.4		215	AA,AC,CC,CU	AA,CC,UU	7	13	1	0.1	0.24	0.6	0.85	0.01	0.01	1.33	0.73	0.0	0.81
16S	8	152	169	A:C	tHW	3°: base pair	Strong	C		0.6	3.0			1.8	89.9	1.8		0.6			0.6			1.8	168	AU,AC	UA,AC,GG	2	5	1	0.29	0.14	0.0	0.14	0.04	0.04	1.73	1.32	0.01	0.91
16S	8	152	169	A:C	tHW	3°: base pair	Strong	E	0.4		0.1		0.2	1.3	83.6	1.0	0.6	9.8		0.9		1.4	0.2	0.6	1021	AC,CC	UG,AC,GA	16	6	0	0.0	0.07	0.0	0.07	0.01	0.01	1.26	1.66	0.0	0.96
16S	8	152	169	A:C	tHW	3°: base pair	Strong	M		0.1		0.1	0.1	0.2		0.2								99.2	832		GU,UG,AA	1	0	0	0.0	0.0	0.0	0.0	0.0	0.0	-0.13	-0.07	0.0	0.0

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

7 rows where conformation = "tHW" and molecule = "16S" sorted by position_1

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