crw2: basepair_combined: 5 rows where conformation = "tHS" and group_code = 3 sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

5 rows where conformation = "tHS" and group_code = 3 sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
23S	5	53	117	A:G	tHS	3°: base pair	Significant	3		0.5		1.5					97.5					0.2			0.2	405	AG		2	2	0	0.0	0.0	0.0	0.0	0.02	0.02	1.9	1.86	0.0	0.64
23S	59	1528	1543	A:G	tHS	3°: base pair	Strong	3	10.1	12.2	7.5	19.3	1.0	1.0	0.6	0.4	36.2								11.5	483	GC,CG,UA,AU,AG	GC,UA,AG	13	17	12	0.8	0.34	0.61	0.95	0.56	0.58	-0.04	-0.14	0.01	0.68
23S	62	1690	1697	A:G	tHS	3°: base pair	Strong	3					0.7		7.9		80.1	3.1		0.7	0.2			7.2	0.2	458	AA,AG,CA,UU	AG,CA,UU	11	19	7	0.47	0.52	0.91	1.43	0.0	0.01	1.33	1.06	0.0	0.72
23S	65	1775	1789	U:A	tHS		Weak	3			98.9				0.2								0.9			458	UA		1	2	0	0.0	0.0	0.0	0.0	0.99	0.99	1.98	1.93	0.0	0.73
23S	66	1803	1814	A:G	tHS	3°: base pair	Weak	3	0.9	0.7	0.2	0.9	37.3		0.2	2.0	55.9		0.2					0.4	1.3	456	GU,AC,AG	UA,GU,AG,CC	6	9	1	0.13	0.88	0.95	1.83	0.03	0.4	0.82	0.69	0.0	0.71

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

5 rows where conformation = "tHS" and group_code = 3 sorted by position_1

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