crw2: basepair_combined: 14 rows where conformation = "No BP", molecule = "16S" and strength = "Strong" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

14 rows where conformation = "No BP", molecule = "16S" and strength = "Strong" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	20	582	758	C:C	No BP	3°: base pair	Strong	T	0.1	7.6	7.8	0.1		52.0	0.9	0.2	0.1	0.5	10.5	0.5		0.1	15.3	0.3	3.9	6988	CG,UA,UG,CC,UC	UG,AA,CC	95	111	26	0.25	0.26	0.66	0.92	0.16	0.7	0.79	0.52	0.03	0.79
16S	20	582	758	C:C	No BP	3°: base pair	Strong	3	0.1	8.9	2.3			57.7		0.1		0.1	12.3	0.6			17.5	0.3		5946	CG,UA,UG,CC,UC	UG,CC	56	55	17	0.31	0.29	0.7	0.99	0.11	0.69	1.2	0.89	0.0	0.83
16S	20	582	758	C:C	No BP	3°: base pair	Strong	B	0.1	11.2	2.6			68.4		0.1		0.2	15.6	0.8			0.6	0.3		4697	CG,UA,UG,CC	UG,CC	54	47	17	0.34	0.5	0.84	1.34	0.14	0.82	1.11	1.08	0.0	0.8
16S	20	582	758	C:C	No BP	3°: base pair	Strong	A			1.8			94.9									3.2			217	UG,UC		0	4	0	0.0	0.0	0.0	0.0	0.02	0.97	2.0	1.52	0.0	0.82
16S	20	582	758	C:C	No BP	3°: base pair	Strong	C		0.6	3.0	1.2		73.8		0.6	0.6		1.8			1.2	15.9	1.2		164	UA,UG,UC	AU,UG,CC	8	17	4	0.32	0.12	0.0	0.12	0.05	0.79	1.55	0.98	0.0	0.9
16S	20	582	758	C:C	No BP	3°: base pair	Strong	E	0.3		0.9			1.2		0.2							97.4		0.1	1032	UC		2	4	0	0.0	0.0	0.0	0.0	0.01	0.02	1.95	1.82	0.0	0.98
16S	20	582	758	C:C	No BP	3°: base pair	Strong	M	0.1	0.3	45.6	0.7	0.2	9.1	7.2	1.1	0.7	3.2	0.1			0.1	0.5	0.1	31.0	886	UA,UG,AA,CA	CG,UA,GU,AC	31	39	5	0.14	0.07	0.0	0.07	0.68	0.81	-0.31	0.37	0.2	0.53
16S	34	1064	1192	G:C	No BP		Strong	T	73.2		2.5	0.4	1.8	0.2	0.2	0.1	0.1	0.7	0.1	12.9	2.5	0.5	4.2	0.4	0.1	6914	GC,UA,CU,GA,UC	GC,UA,AG,CU	53	71	16	0.26	0.58	0.89	1.47	0.76	0.78	0.99	1.0	0.0	0.81
16S	34	1064	1192	G:C	No BP		Strong	3	79.8		0.4		1.8	0.2		0.1	0.1			15.9	0.1	0.4	0.8	0.2	0.1	5606	GC,CU	GC,UA,AG,CU	9	32	6	0.29	0.82	0.96	1.78	0.8	0.82	1.23	1.21	0.0	0.78
16S	34	1064	1192	G:C	No BP		Strong	B	97.1				2.1			0.1					0.1	0.6				4404	GC,GU		2	24	1	0.08	0.0	0.0	0.0	0.97	0.99	1.99	1.78	0.0	0.75
16S	34	1064	1192	G:C	No BP		Strong	A	100.0																	198	GC		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.75
16S	34	1064	1192	G:C	No BP		Strong	C	89.6				6.1		0.6							3.7				163	GC,GU,GG	GC,AA	1	8	1	0.22	0.06	0.0	0.06	0.9	0.96	1.95	1.4	0.0	0.9
16S	34	1064	1192	G:C	No BP		Strong	E		0.1	2.2		1.0	1.3			0.3	0.1	0.1	89.3			4.3	1.1	0.2	1000	UA,CU,UC	AG,CU,UC	7	8	5	0.67	0.44	0.94	1.38	0.02	0.05	1.45	1.45	0.0	0.95
16S	34	1064	1192	G:C	No BP		Strong	M	38.0	0.1	12.9	3.0	1.0		1.0	0.2	0.3	3.9	0.7		15.0	0.3	21.7	1.6	0.5	1150	GC,UA,AU,CA,GA,UC	GC,CG,UA,AU	43	31	9	0.24	0.26	0.54	0.8	0.54	0.55	0.55	0.73	0.0	0.99

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

14 rows where conformation = "No BP", molecule = "16S" and strength = "Strong" sorted by position_1

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