crw2: basepair_combined: 15 rows where conformation = "No BP", group_code = "T" and strength = "Weak" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

15 rows where conformation = "No BP", group_code = "T" and strength = "Weak" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	1	13	21	U:G	No BP	Weak	T		0.1	8.8	0.1		88.5	0.1		1.5	0.1			0.1	0.1		0.3	0.5	3890	UA,UG	UG,AA	14	68	3	0.07	0.02	0.0	0.02	0.09	0.98	1.8	1.5	0.0	0.46
16S	15	375	388	U:G	No BP	Weak	T		0.1	0.9			97.8			0.1					0.1	0.1	0.4	0.4	6852	UG		10	30	4	0.2	0.05	0.0	0.05	0.01	0.99	1.94	1.68	0.02	0.8
16S	21	606	632	G:U	No BP	Weak	T	1.7	1.7	1.4	1.7	47.5	1.7	0.4	0.1	0.4		0.3	0.3	2.0	8.1	1.4	2.4	28.8	7251	GU,GA,GG,UU	GU,UG,AA,CC	89	148	18	0.15	0.15	0.0	0.15	0.09	0.78	-0.06	-0.3	0.01	0.61
23S	33	687	775	C:G	No BP	Weak	T		95.8	0.2	0.9		1.2		0.1	0.3	0.1	0.1	0.3	0.1	0.3			0.3	886	CG	CG,UA,AU	11	7	0	0.0	0.29	0.97	1.27	0.97	0.98	1.72	1.8	0.0	0.84
23S	34	703	729	U:G	No BP	Weak	T		15.1	0.1	0.1	0.1	71.4	0.2		5.1	0.1		0.1		0.6			7.1	887	CG,UG,AG	GU,UG,AA	40	4	1	0.04	0.02	0.0	0.02	0.17	0.93	0.55	1.49	0.01	0.79
16S	31	960	975	U:A	No BP	Weak	T			61.8	14.8		22.4	0.2		0.1						0.2	0.2	0.3	6871	UA,AU,UG	UA,AU	10	32	1	0.05	0.39	0.77	1.16	0.77	0.99	1.35	0.64	0.0	0.81
16S	31	961	974	U:A	No BP	Weak	T	0.1	0.1	66.4	0.1	0.1	16.8	0.3			0.6	0.2	2.1			8.7	4.1	0.3	6856	UA,UG,CU,UC,UU	GC,UA,CU	48	99	4	0.05	0.07	0.0	0.07	0.67	0.84	1.73	0.59	0.0	0.8
16S	34	1053	1205	G:U	No BP	Weak	T	2.6			15.1	81.7			0.1				0.1					0.3	6891	GC,AU,GU	GU,AC	7	20	0	0.0	0.01	0.0	0.01	0.18	1.0	1.35	1.79	0.0	0.81
16S	40	1158	1178	C:G	No BP	Weak	T		81.2	0.4	0.1		0.5				0.1	1.8	0.2		0.1	0.2	0.1	15.2	7138	CG	CG,UA,AU	12	156	4	0.05	0.13	0.0	0.13	0.96	0.97	0.97	1.02	0.12	0.71
16S	40	1159	1177	U:G	No BP	Weak	T		5.5	0.2	0.1		73.5	1.5	0.3	1.5	0.4	0.4	0.1	0.1	0.8		0.4	15.2	7135	CG,UG	UG,AA,CC	80	167	11	0.09	0.16	0.0	0.16	0.07	0.94	0.49	1.0	0.12	0.71
16S	45	1506	1529	U:G	No BP	Weak	T		0.6	4.6			93.0								0.2	0.5	0.4	0.7	2260	UA,UG		7	19	0	0.0	0.01	0.0	0.01	0.05	0.99	1.9	1.58	0.0	0.26
23S	66	1799	1820	G:U	No BP	Weak	T	22.1		0.1	0.6	73.2			0.1					0.4				3.5	842	GC,GU	UA,GU,AC	3	10	1	0.15	0.01	0.0	0.01	0.24	0.99	1.63	0.93	0.0	0.78
23S	69	1911	1919	U:A	No BP	Weak	T			97.9							0.5						0.1	1.5	852	UA		2	0	0	0.0	0.0	0.0	0.0	0.99	0.99	1.82	1.86	0.0	0.8
23S	74	2075	2434	U:A	No BP	Weak	T		0.1	97.8			0.4	0.2					0.1			0.2	1.2		845	UA	CG,UA	4	8	3	0.5	0.05	0.0	0.05	0.98	0.98	1.94	1.83	0.0	0.81
23S	80	2249	2255	U:G	No BP	Weak	T			4.1			94.6				0.6				0.4	0.1	0.1	0.1	845	UA,UG	UG,CA	2	10	1	0.17	0.11	0.0	0.11	0.04	0.99	1.91	1.68	0.0	0.81

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

15 rows where conformation = "No BP", group_code = "T" and strength = "Weak" sorted by position_1

Advanced export