crw2: basepair_combined: 15 rows where conformation = "No BP", group_code = "M" and strength = "Weak" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

15 rows where conformation = "No BP", group_code = "M" and strength = "Weak" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	1	13	21	U:G	No BP	Weak	M			50.2	0.1		38.6	0.4		8.1	0.7			0.4	0.1		0.6	0.6	669	UA,UG,AG	UA,AG	10	59	2	0.06	0.16	0.0	0.16	0.51	0.9	1.4	0.89	0.0	0.57
16S	15	375	388	U:G	No BP	Weak	M	0.2	0.4	5.1			92.9	0.4		0.1					0.2		0.1	0.6	829	UA,UG	GC,UG,AA	7	8	3	0.4	0.09	0.0	0.09	0.06	0.99	1.82	0.84	0.11	0.71
16S	21	606	632	G:U	No BP	Weak	M		0.1	0.6	0.2	2.0	0.2	0.4		0.2	0.1			0.1			0.4	95.8	1021	GU	UA,GU,AG	7	5	1	0.17	0.01	0.0	0.01	0.01	0.03	-0.25	-0.23	0.0	0.0
23S	33	687	775	C:G	No BP	Weak	M		89.7	0.8	3.1		4.2		0.4	0.4				0.4	0.4			0.8	262	CG,AU,UG	CG,UA,AU	8	4	0	0.0	0.4	0.94	1.34	0.94	0.98	1.34	1.62	0.01	0.83
23S	34	703	729	U:G	No BP	Weak	M		6.1	0.4	0.4	0.4	48.7	0.8		17.1			0.4		1.9			24.0	263	CG,UG,AG	GU,UG,AA	20	4	1	0.08	0.04	0.0	0.04	0.09	0.73	-0.3	0.73	0.04	0.64
16S	31	960	975	U:A	No BP	Weak	M			6.5	89.1		0.6	0.9	0.3	0.6		0.1	0.3			1.0	0.7	0.1	1153	UA,AU	UA,AU,CC	9	16	1	0.08	0.61	0.96	1.56	0.96	0.96	1.53	1.43	0.0	0.99
16S	31	961	974	U:A	No BP	Weak	M	0.6		54.6	0.6	0.4	0.1	1.5	0.1		3.3	0.3	12.3	0.1		8.9	17.3		1151	UA,CA,CU,UC,UU	GC,UA,CU	43	61	4	0.08	0.28	0.67	0.96	0.56	0.56	1.14	0.69	0.0	0.99
16S	34	1053	1205	G:U	No BP	Weak	M	0.5			90.9	7.8			0.5				0.1				0.1	0.1	1152	AU,GU	GC,AU	5	6	0	0.0	0.06	0.0	0.06	0.92	0.99	1.55	1.9	0.0	0.99
16S	40	1158	1178	C:G	No BP	Weak	M	0.1	2.5	2.3	0.3			0.2		0.1			0.3		0.2		0.4	93.5	1152	CG,UA	GC,CG,UA,AU	5	145	3	0.04	0.03	0.0	0.03	0.05	0.05	-0.32	0.02	0.0	0.0
16S	40	1159	1177	U:G	No BP	Weak	M		0.3	0.3	0.2	0.1	2.5	0.1		0.1	0.3	2.0	0.2		0.2		0.4	93.6	1152	UG,CC	AU,UG,CC	8	148	4	0.05	0.02	0.0	0.02	0.01	0.03	-0.32	0.0	0.0	0.0
16S	45	1506	1529	U:G	No BP	Weak	M			15.6			83.0								0.1	0.1	0.9	0.1	672	UA,UG		1	10	0	0.0	0.0	0.0	0.0	0.16	0.99	1.99	1.27	0.0	0.58
23S	66	1799	1820	G:U	No BP	Weak	M	0.7		0.4	1.8	89.0												8.1	283	GU	UA,GU	3	3	1	0.33	0.12	0.0	0.12	0.03	1.0	1.27	1.37	0.0	0.83
23S	69	1911	1919	U:A	No BP	Weak	M			96.1														3.8	311	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	1.71	1.71	0.0	0.96
23S	74	2075	2434	U:A	No BP	Weak	M		0.3	94.8			1.0	0.6					0.3			0.6	2.3		309	UA,UU	CG,UA	4	7	3	0.55	0.06	0.0	0.06	0.95	0.96	1.85	1.67	0.0	0.99
23S	80	2249	2255	U:G	No BP	Weak	M			10.7			87.1				1.6					0.3	0.3		309	UA,UG	UG,CA	1	8	1	0.22	0.12	0.0	0.12	0.11	0.98	1.88	1.4	0.0	0.99

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

15 rows where conformation = "No BP", group_code = "M" and strength = "Weak" sorted by position_1

Advanced export