crw2: basepair_combined: 12 rows where conformation = "No BP", group_code = "M" and strength = "Strong" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

12 rows where conformation = "No BP", group_code = "M" and strength = "Strong" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	20	582	758	C:C	No BP	3°: base pair	Strong	M	0.1	0.3	45.6	0.7	0.2	9.1	7.2	1.1	0.7	3.2	0.1			0.1	0.5	0.1	31.0	886	UA,UG,AA,CA	CG,UA,GU,AC	31	39	5	0.14	0.07	0.0	0.07	0.68	0.81	-0.31	0.37	0.2	0.53
16S	34	1064	1192	G:C	No BP		Strong	M	38.0	0.1	12.9	3.0	1.0		1.0	0.2	0.3	3.9	0.7		15.0	0.3	21.7	1.6	0.5	1150	GC,UA,AU,CA,GA,UC	GC,CG,UA,AU	43	31	9	0.24	0.26	0.54	0.8	0.54	0.55	0.55	0.73	0.0	0.99
23S	55	1420	1578	A:U	No BP		Strong	M		1.1	1.4	2.2					0.4								94.9	276	AU	CG,UA,AU	2	2	2	1.0	0.88	0.93	1.8	0.93	0.93	-0.29	-0.31	0.0	0.04
23S	59	1527	1544	G:A	No BP	3°: base pair	Strong	M				0.4													99.7	276			0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	-0.03	-0.06	0.0	0.0
23S	71	1935	1962	G:C	No BP		Strong	M	29.4			45.2	11.9		0.6	6.1	2.9				0.6	1.6	0.6	1.0		310	GC,AU,GU,AC,AG	GC,AU	16	19	6	0.34	0.54	0.74	1.28	0.74	0.86	0.91	0.73	0.0	0.99
23S	76.1	2112	2169	G:A	No BP	3°: pseudoknot	Strong	M		0.6	2.6				2.6		1.6	0.3			5.2		0.3		86.7	309	UA,AA,GA	AG,GA,UC	5	2	2	0.57	0.24	0.54	0.78	0.24	0.24	-0.54	-0.42	0.0	0.13
23S	76.1	2113	2170	U:A	No BP	3°: pseudoknot	Strong	M		1.0	7.8			1.6	0.3			1.0			0.6				87.7	309	UA	CG,UA	3	2	0	0.0	0.21	0.71	0.93	0.71	0.84	-0.42	-0.42	0.01	0.12
23S	76.1	2117	2172	A:U	No BP	3°: pseudoknot	Strong	M	1.6		1.6	5.5	0.3		1.9		1.3				1.0				86.7	309	AU	GC,UA,AU	4	7	3	0.55	0.42	0.66	1.07	0.66	0.68	-0.47	-0.54	0.0	0.13
23S	84	2296	2322	U:A	No BP		Strong	M		1.0	10.0	0.3		0.6	0.3				0.3				0.3	0.3	86.7	309	UA	CG,UA,AU	4	6	3	0.6	0.4	0.85	1.25	0.85	0.9	-0.4	-0.46	0.01	0.13
23S	94	2637	2781	U:A	No BP		Strong	M	0.9		7.9	3.5		0.4	1.8		0.9				1.8			0.4	82.3	227	UA,AU	GC,UA,AU	5	8	2	0.31	0.46	0.7	1.16	0.7	0.72	-0.58	-0.62	0.12	0.13
23S	98	2796	2800	U:A	No BP		Strong	M																	100.0	219			0	0	0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
23S	101	2849	2866	U:U	No BP	3°: base pair	Strong	M			4.4			6.7		4.4				2.2			8.9	31.1	42.2	45	UA,UG,AC,CU,UC,UU	AC,UU	4	3	0	0.0	0.17	0.0	0.17	0.08	0.19	0.16	-0.75	0.03	0.08

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

12 rows where conformation = "No BP", group_code = "M" and strength = "Strong" sorted by position_1

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