crw2: basepair_combined: 12 rows where conformation = "No BP", group_code = "M" and molecule = "16S" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

12 rows where conformation = "No BP", group_code = "M" and molecule = "16S" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AC	AG	CA	CC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	1	13	21	U:G	No BP		Weak	M			50.2	0.1		38.6	0.4		8.1	0.7			0.4	0.1		0.6	0.6	669	UA,UG,AG	UA,AG	10	59	2	0.06	0.16	0.0	0.16	0.51	0.9	1.4	0.89	0.0	0.57
16S	15	375	388	U:G	No BP		Weak	M	0.2	0.4	5.1			92.9	0.4		0.1					0.2		0.1	0.6	829	UA,UG	GC,UG,AA	7	8	3	0.4	0.09	0.0	0.09	0.06	0.99	1.82	0.84	0.11	0.71
16S	20	582	758	C:C	No BP	3°: base pair	Strong	M	0.1	0.3	45.6	0.7	0.2	9.1	7.2	1.1	0.7	3.2	0.1			0.1	0.5	0.1	31.0	886	UA,UG,AA,CA	CG,UA,GU,AC	31	39	5	0.14	0.07	0.0	0.07	0.68	0.81	-0.31	0.37	0.2	0.53
16S	21	606	632	G:U	No BP		Weak	M		0.1	0.6	0.2	2.0	0.2	0.4		0.2	0.1			0.1			0.4	95.8	1021	GU	UA,GU,AG	7	5	1	0.17	0.01	0.0	0.01	0.01	0.03	-0.25	-0.23	0.0	0.0
16S	30	944	1237	G:C	No BP		No Support	M	98.4				1.1			0.2					0.1				0.3	1152	GC		1	3	0	0.0	0.0	0.0	0.0	0.99	1.0	1.95	1.9	0.0	0.99
16S	31	960	975	U:A	No BP		Weak	M			6.5	89.1		0.6	0.9	0.3	0.6		0.1	0.3			1.0	0.7	0.1	1153	UA,AU	UA,AU,CC	9	16	1	0.08	0.61	0.96	1.56	0.96	0.96	1.53	1.43	0.0	0.99
16S	31	961	974	U:A	No BP		Weak	M	0.6		54.6	0.6	0.4	0.1	1.5	0.1		3.3	0.3	12.3	0.1		8.9	17.3		1151	UA,CA,CU,UC,UU	GC,UA,CU	43	61	4	0.08	0.28	0.67	0.96	0.56	0.56	1.14	0.69	0.0	0.99
16S	34	1053	1205	G:U	No BP		Weak	M	0.5			90.9	7.8			0.5				0.1				0.1	0.1	1152	AU,GU	GC,AU	5	6	0	0.0	0.06	0.0	0.06	0.92	0.99	1.55	1.9	0.0	0.99
16S	34	1064	1192	G:C	No BP		Strong	M	38.0	0.1	12.9	3.0	1.0		1.0	0.2	0.3	3.9	0.7		15.0	0.3	21.7	1.6	0.5	1150	GC,UA,AU,CA,GA,UC	GC,CG,UA,AU	43	31	9	0.24	0.26	0.54	0.8	0.54	0.55	0.55	0.73	0.0	0.99
16S	40	1158	1178	C:G	No BP		Weak	M	0.1	2.5	2.3	0.3			0.2		0.1			0.3		0.2		0.4	93.5	1152	CG,UA	GC,CG,UA,AU	5	145	3	0.04	0.03	0.0	0.03	0.05	0.05	-0.32	0.02	0.0	0.0
16S	40	1159	1177	U:G	No BP		Weak	M		0.3	0.3	0.2	0.1	2.5	0.1		0.1	0.3	2.0	0.2		0.2		0.4	93.6	1152	UG,CC	AU,UG,CC	8	148	4	0.05	0.02	0.0	0.02	0.01	0.03	-0.32	0.0	0.0	0.0
16S	45	1506	1529	U:G	No BP		Weak	M			15.6			83.0								0.1	0.1	0.9	0.1	672	UA,UG		1	10	0	0.0	0.0	0.0	0.0	0.16	0.99	1.99	1.27	0.0	0.58

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

12 rows where conformation = "No BP", group_code = "M" and molecule = "16S" sorted by position_1

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