crw2: basepair_combined: 19 rows where conformation = "No BP", group_code = "A" and molecule = "23S" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

19 rows where conformation = "No BP", group_code = "A" and molecule = "23S" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AA	AG	CA	GA	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	PE	PES	Cov1	Cov3	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
23S	33	687	775	C:G	No BP		Weak	A		100.0											37	CG		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.9
23S	33	688	774	U:G	No BP		Significant	A			100.0										37	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.9
23S	34	703	729	U:G	No BP		Weak	A		32.4				67.6							37	CG,UG		3	0	0	0.0	0.0	0.0	0.0	0.32	1.0	1.09	2.0	0.0	0.9
23S	55	1420	1578	A:U	No BP		Strong	A	39.0			29.3	7.3							24.4	41	GC,AU,GU	GC,AU	3	3	3	1.0	0.8	0.9	1.7	0.9	1.0	-0.02	-0.04	0.0	0.76
23S	59	1527	1544	G:A	No BP	3°: base pair	Strong	A					73.2							26.8	41	GU		0	1	0	0.0	0.0	0.0	0.0	0.0	1.0	0.57	0.56	0.07	0.73
23S	66	1799	1820	G:U	No BP		Weak	A	90.2				9.8								41	GC,GU		0	2	0	0.0	0.0	0.0	0.0	0.9	1.0	2.0	1.54	0.0	1.0
23S	69	1911	1919	U:A	No BP		Weak	A			100.0										41	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	1.0
23S	71	1935	1962	G:C	No BP		Strong	A	22.0	51.2			26.8								41	GC,CG,GU	CG,GU	1	1	0	0.0	0.55	0.78	1.33	0.73	1.0	1.0	0.52	0.0	1.0
23S	74	2075	2434	U:A	No BP		Weak	A			100.0										41	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	1.0
23S	76.1	2112	2169	G:A	No BP	3°: pseudoknot	Strong	A				4.9				12.2		82.9			41	AU,AG,GA	AG,GA	3	3	3	1.0	0.71	0.95	1.67	0.05	0.05	1.34	1.19	0.0	1.0
23S	76.1	2113	2170	U:A	No BP	3°: pseudoknot	Strong	A		29.3	48.8						17.1	4.9			41	CG,UA,CA,GA	CG,UA	2	1	0	0.0	0.57	0.78	1.35	0.78	0.78	0.77	1.13	0.0	1.0
23S	76.1	2117	2172	A:U	No BP	3°: pseudoknot	Strong	A	85.4			14.6									41	GC,AU	GC,AU	1	1	1	1.0	1.0	1.0	2.0	1.0	1.0	1.4	1.4	0.0	1.0
23S	80	2249	2255	U:G	No BP		Weak	A						100.0							41	UG		0	0	0	0.0	0.0	0.0	0.0	0.0	1.0	2.0	2.0	0.0	1.0
23S	84	2296	2322	U:A	No BP		Strong	A			100.0										41	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	1.0
23S	90	2511	2577	U:A	No BP		No Support	A			100.0										41	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	1.0
23S	94	2637	2781	U:A	No BP		Strong	A			100.0										41	UA		0	0	0	0.0	0.0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	1.0
23S	98	2796	2800	U:A	No BP		Strong	A	30.0	2.5		5.0		5.0						57.5	40	GC,CG,AU,UG	GC,AU,UG	2	2	2	1.0	0.8	0.94	1.74	0.88	1.0	-0.69	-0.63	0.0	0.41
23S	99	2808	2891	G:U	No BP	3°: base pair	???	A	7.9	2.6	2.6				2.6		36.8	13.2		34.3	38	GC,CG,UA,AA,CA,GA	GC,CA	5	1	1	0.33	0.27	0.68	0.95	0.2	0.2	0.43	-0.11	0.32	0.61
23S	101	2849	2866	U:U	No BP	3°: base pair	Strong	A			2.6			10.5					78.9	7.9	38	UA,UG,UU		0	1	0	0.0	0.0	0.0	0.0	0.03	0.14	2.0	0.8	0.07	0.85

Advanced export

JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

19 rows where conformation = "No BP", group_code = "A" and molecule = "23S" sorted by position_1

Advanced export