crw2: basepair_combined: 12 rows where conformation = "No BP", group_code = "A" and molecule = "16S" sorted by position

predominant_types: Base-pair types shown in bold in the published table (most frequent).
covarying_types: Base-pair types marked * in the published table (involved in a covariation).
sequences: Number of sequences in the group.

12 rows where conformation = "No BP", group_code = "A" and molecule = "16S" sorted by position_1

descending

molecule	helix_number	position_1 ▼	position_2	reference_base_pair	conformation	tertiary_type	strength	group_code	GC	CG	UA	AU	GU	UG	AC	CU	GA	GG	UC	UU	gap	sequences	predominant_types	covarying_types	Xch	Ych	Cov1	C1_C3	WC	WCGU	XCons	YCons	DfDel	PNuc
16S	1	13	21	U:G	No BP		Weak	A						100.0								154	UG		0	0	0.0	0.0	0.0	1.0	2.0	2.0	0.0	0.58
16S	15	375	388	U:G	No BP		Weak	A			2.2			95.6							2.2	228	UA,UG		0	3	0.0	0.0	0.02	1.0	1.81	1.85	0.02	0.84
16S	20	582	758	C:C	No BP	3°: base pair	Strong	A			1.8			94.9					3.2			217	UG,UC		0	4	0.0	0.0	0.02	0.97	2.0	1.52	0.0	0.82
16S	21	606	632	G:U	No BP		Weak	A	5.2			2.2	47.0	4.3		0.4	0.9	3.9	4.3	31.0	0.9	232	GC,AU,GU,UG,GG,UC,UU	GU,UC	3	14	0.08	0.08	0.07	0.59	0.86	1.0	0.01	0.87
16S	30	944	1237	G:C	No BP		No Support	A	99.5						0.5							191	GC		0	0	0.0	0.0	0.99	0.99	1.96	2.0	0.0	0.72
16S	31	960	975	U:A	No BP		Weak	A						100.0								208	UG		0	0	0.0	0.0	0.0	1.0	2.0	2.0	0.0	0.79
16S	31	961	974	U:A	No BP		Weak	A		3.3	3.3			78.5						14.8		209	CG,UA,UG,UU		3	2	0.0	0.0	0.07	0.85	1.79	1.22	0.0	0.79
16S	34	1053	1205	G:U	No BP		Weak	A	1.0			0.5	98.5									197	GU		0	1	0.0	0.0	0.01	1.0	1.96	1.92	0.0	0.75
16S	34	1064	1192	G:C	No BP		Strong	A	100.0													198	GC		0	0	0.0	0.0	1.0	1.0	2.0	2.0	0.0	0.75
16S	40	1158	1178	C:G	No BP		Weak	A		99.5				0.5								195	CG		1	0	0.0	0.0	0.99	1.0	1.95	2.0	0.0	0.74
16S	40	1159	1177	U:G	No BP		Weak	A		53.0				46.0		0.5				0.5		198	CG,UG	CG,UU	7	1	0.01	0.01	0.53	0.99	1.0	1.92	0.0	0.75
16S	45	1506	1529	U:G	No BP		Weak	A						95.0					5.0			80	UG,UC		0	1	0.0	0.0	0.0	0.95	2.0	1.71	0.0	0.3

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JSON shape: default, array, newline-delimited

CREATE VIEW basepair_combined as
select f.molecule, f.helix_number, f.position_1, f.position_2,
       f.reference_base_pair, f.conformation, f.tertiary_type, f.strength, f.group_code,
       f.GC, f.CG, f.UA, f.AU, f.GU, f.UG, f.AA, f.AC, f.AG, f.CA, f.CC, f.CU, f.GA, f.GG, f.UC, f.UU, f.gap, f.Seq as sequences,
       f.predominant_types, f.covarying_types,
       s.Xch, s.Ych, s.PE, s.PES, s.Cov1, s.Cov3, s."C1+C3" as C1_C3,
       s.WC, s.WCGU, s.XCons, s.YCons, s.DfDel, s.PNuc
from basepair_frequency f
left join basepair_collective_score s
  on s.molecule = f.molecule and s.position_1 = f.position_1
 and s.position_2 = f.position_2 and s.group_code = f.group_code;

Base-pair statistics (frequencies and scores together) (view)

12 rows where conformation = "No BP", group_code = "A" and molecule = "16S" sorted by position_1

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