Base-pair collective (covariation) scores

8 rows where group_code = "T", molecule = "23S" and strength = "No Support" sorted by position_1

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Suggested facets: helix_number, reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, YCons, DfDel, PNuc, Seq

conformation 2

strength 1

  • No Support · 8 ✖

molecule 1

group_code 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
4530 4530 23S 25.1 566 575   v4 U:A cWW       No Support T 0 1 0 0.0 0.0 0.0 0.0 1.0 1.0 1.88 1.87 0.0 0.84 887
6140 6140 23S 49.1 1310 1604   v4 G:C cWW       No Support T 10 2 0 0.0 0.25 0.99 1.25 0.99 0.99 0.61 0.57 0.17 0.58 839
7687 7687 23S 74 2064 2446   v4 C:G cWW       No Support T 1 1 1 1.0 0.71 1.0 1.71 1.0 1.0 1.92 1.93 0.0 0.79 831
7750 7750 23S 74 2074 2435   v4 U:A cWW       No Support T 1 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.97 1.95 0.0 0.81 845
8660 8660 23S 90 2508 2580   v4 G:U cWW       No Support T 1 0 0 0.0 0.0 0.0 0.0 0.0 0.99 1.91 2.0 0.0 0.74 778
8681 8681 23S 90 2511 2577   v4 U:A No BP       No Support T 2 0 0 0.0 0.0 0.0 0.0 0.99 0.99 1.93 2.0 0.0 0.74 778
8842 8842 23S 93 2591 2603   v4 C:G cWW       No Support T 2 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.96 1.97 0.0 0.7 734
9381 9381 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support T 34 30 13 0.41 0.35 0.51 0.86 0.47 0.68 0.09 0.44 0.0 0.4 426

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");