Base-pair collective (covariation) scores

7 rows where conformation = "tWW", molecule = "16S" and strength = "Strong" sorted by position_1

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Suggested facets: WC, WCGU, XCons, YCons, DfDel, PNuc

group_code 7

strength 1

  • Strong · 7 ✖

molecule 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1702 1702 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong T 166 127 52 0.35 0.68 0.85 1.53 0.06 0.07 0.69 0.8 0.0 0.84 7189
1703 1703 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong 3 59 60 38 0.64 0.81 0.93 1.74 0.02 0.03 0.95 0.98 0.0 0.85 6134
1704 1704 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong B 39 43 31 0.76 0.86 0.96 1.82 0.0 0.01 1.13 1.13 0.0 0.83 4860
1705 1705 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong A 4 6 4 0.8 0.94 0.99 1.93 0.0 0.01 1.26 1.21 0.0 0.91 241
1706 1706 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong C 6 8 6 0.86 0.9 0.98 1.88 0.0 0.01 1.13 1.14 0.0 0.91 167
1707 1707 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong E 16 11 3 0.22 0.47 0.77 1.25 0.13 0.16 0.64 0.98 0.0 0.98 1033
1708 1708 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong M 101 59 8 0.1 0.18 0.0 0.18 0.29 0.35 0.16 0.15 0.02 0.74 896

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");