home / crw2

Base-pair collective (covariation) scores

1 row where conformation = "tWW", group_code = "M" and molecule = "16S" sorted by position_1

✎ View and edit SQL

This data as json, CSV (advanced)

strength 1

  • Strong 1

molecule 1

  • 16S · 1 ✖

group_code 1

  • M · 1 ✖

conformation 1

  • tWW · 1 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1708 1708 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong M 101 59 8 0.1 0.18 0.0 0.18 0.29 0.35 0.16 0.15 0.02 0.74 896

Advanced export

JSON shape: default, array, newline-delimited

CSV options:

CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");
Powered by Datasette · Queries took 568.045ms