Base-pair collective (covariation) scores

6 rows where conformation = "tWW", group_code = "E" and strength = "Strong" sorted by position_1

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Suggested facets: reference_base_pair, tertiary_type, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, DfDel, Seq

molecule 2

strength 1

  • Strong · 6 ✖

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3954 3954 23S 12.1 234 430   v4 U:A tWW       Strong E 1 1 0 0.0 0.0 0.0 0.0 0.95 0.98 1.79 1.82 0.01 0.75 200
1707 1707 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong E 16 11 3 0.22 0.47 0.77 1.25 0.13 0.16 0.64 0.98 0.0 0.98 1033
5788 5788 23S 43.1 1082 1086   v4 U:A tWW   3°: base pair   Strong E 1 0 0 0.0 0.0 0.0 0.0 0.99 1.0 1.86 1.95 0.0 0.8 211
7174 7174 23S 65.1 1782 2586   v4 U:U tWW   3°: pseudoknot   Strong E 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 1.93 2.0 0.0 0.51 135
7237 7237 23S 66 1800 1817   v4 C:G tWW   3°: base pair   Strong E 1 5 2 0.67 0.61 0.95 1.56 0.95 0.97 1.5 1.24 0.01 0.58 155
7510 7510 23S 69.1 1925 1929   v4 C:G tWW   3°: base pair   Strong E 0 1 0 0.0 0.0 0.0 0.0 0.0 1.0 1.93 1.94 0.0 0.59 155

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");