Base-pair collective (covariation) scores

6 rows where conformation = "tWW", group_code = "A" and strength = "Strong" sorted by position_1

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Suggested facets: reference_base_pair, tertiary_type, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, PNuc, Seq

molecule 2

strength 1

  • Strong · 6 ✖

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3952 3952 23S 12.1 234 430   v4 U:A tWW       Strong A 1 0 0 0.0 0.33 0.94 1.28 0.94 0.94 1.51 1.7 0.0 0.88 36
1705 1705 16S 23.1 722 733   v4 G:G tWW   3°: base pair   Strong A 4 6 4 0.8 0.94 0.99 1.93 0.0 0.01 1.26 1.21 0.0 0.91 241
5786 5786 23S 43.1 1082 1086   v4 U:A tWW   3°: base pair   Strong A 3 3 3 1.0 1.0 1.0 2.0 1.0 1.0 1.03 1.03 0.0 0.9 37
7172 7172 23S 65.1 1782 2586   v4 U:U tWW   3°: pseudoknot   Strong A 3 3 3 1.0 1.0 1.0 2.0 0.0 0.0 1.34 1.34 0.0 1.0 41
7235 7235 23S 66 1800 1817   v4 C:G tWW   3°: base pair   Strong A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
7508 7508 23S 69.1 1925 1929   v4 C:G tWW   3°: base pair   Strong A 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 1.0 41

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");