Base-pair collective (covariation) scores

7 rows where conformation = "tWS" and molecule = "16S" sorted by position_1

✎ View and edit SQL

This data as json, CSV (advanced)

Suggested facets: Xch, Ych, PE, PES, Cov1, C1+C3, WC, WCGU, YCons, DfDel, PNuc

group_code 7

strength 1

molecule 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
120 120 16S 3 37 547   v4 U:A tWS       Weak T 34 24 5 0.17 0.06 0.0 0.06 0.98 0.99 1.85 1.89 0.0 0.65 5551
121 121 16S 3 37 547   v4 U:A tWS       Weak 3 4 9 0 0.0 0.02 0.0 0.02 0.99 1.0 1.93 1.92 0.0 0.65 4665
122 122 16S 3 37 547   v4 U:A tWS       Weak B 4 5 0 0.0 0.02 0.0 0.02 0.99 0.99 1.94 1.91 0.0 0.61 3570
123 123 16S 3 37 547   v4 U:A tWS       Weak A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.69 183
124 124 16S 3 37 547   v4 U:A tWS       Weak C 3 0 0 0.0 0.0 0.0 0.0 0.97 0.97 1.79 1.94 0.01 0.83 152
125 125 16S 3 37 547   v4 U:A tWS       Weak E 0 4 0 0.0 0.0 0.0 0.0 0.99 1.0 1.9 1.91 0.01 0.86 912
126 126 16S 3 37 547   v4 U:A tWS       Weak M 27 15 5 0.24 0.09 0.0 0.09 0.92 0.93 1.48 1.78 0.0 0.63 738

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");