Base-pair collective (covariation) scores

14 rows where conformation = "tWH" and strength = "Strong" sorted by position_1

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Suggested facets: helix_number, position_1, position_2, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, DfDel, PNuc

group_code 7

molecule 2

strength 1

  • Strong · 14 ✖

conformation 1

  • tWH · 14 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1002 1002 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong T 44 43 17 0.39 0.81 0.95 1.76 0.73 0.73 -0.04 0.06 0.01 0.6 6924
1003 1003 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong 3 38 36 17 0.46 0.82 0.95 1.77 0.72 0.72 0.2 0.31 0.0 0.68 5934
1004 1004 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong B 34 32 14 0.42 0.82 0.95 1.77 0.72 0.72 1.03 1.17 0.0 0.8 4678
1005 1005 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong A 4 4 4 1.0 0.96 0.99 1.95 0.77 0.78 1.16 1.19 0.0 0.85 226
1006 1006 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong C 1 1 0 0.0 0.0 0.0 0.0 0.99 0.99 1.95 1.95 0.0 0.9 163
1007 1007 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong E 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -0.04 0.0 0.0 1030
1008 1008 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong M 5 6 0 0.0 0.0 0.0 0.0 0.04 0.04 -0.31 -0.42 0.0 0.0 835
4691 4691 23S 28 607 621   v4 U:A tWH       Strong T 19 16 7 0.4 0.3 0.81 1.1 0.8 0.87 -0.14 -0.14 0.0 0.62 883
4692 4692 23S 28 607 621   v4 U:A tWH       Strong 3 16 15 7 0.45 0.27 0.77 1.04 0.77 0.85 0.76 0.74 0.0 0.81 521
4693 4693 23S 28 607 621   v4 U:A tWH       Strong B 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.86 282
4694 4694 23S 28 607 621   v4 U:A tWH       Strong A 0 0 0 0.0 0.0 0.0 0.0 0.97 1.0 2.0 1.82 0.0 0.9 37
4695 4695 23S 28 607 621   v4 U:A tWH       Strong C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.97 100
4696 4696 23S 28 607 621   v4 U:A tWH       Strong E 16 15 7 0.45 0.27 0.4 0.67 0.39 0.6 0.02 -0.11 0.01 0.74 202
4697 4697 23S 28 607 621   v4 U:A tWH       Strong M 3 1 0 0.0 0.58 0.76 1.34 0.76 0.76 -0.47 -0.45 0.0 0.11 262

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");