Base-pair collective (covariation) scores

2 rows where conformation = "tWH", group_code = "T" and strength = "Strong" sorted by position_1

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molecule 2

strength 1

  • Strong · 2 ✖

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1002 1002 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong T 44 43 17 0.39 0.81 0.95 1.76 0.73 0.73 -0.04 0.06 0.01 0.6 6924
4691 4691 23S 28 607 621   v4 U:A tWH       Strong T 19 16 7 0.4 0.3 0.81 1.1 0.8 0.87 -0.14 -0.14 0.0 0.62 883

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");