Base-pair collective (covariation) scores

2 rows where conformation = "tWH", group_code = 3 and strength = "Strong" sorted by position_1

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molecule 2

strength 1

  • Strong · 2 ✖

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1003 1003 16S 17 438 496   v4 U:A tWH   3°: base pair   Strong 3 38 36 17 0.46 0.82 0.95 1.77 0.72 0.72 0.2 0.31 0.0 0.68 5934
4692 4692 23S 28 607 621   v4 U:A tWH       Strong 3 16 15 7 0.45 0.27 0.77 1.04 0.77 0.85 0.76 0.74 0.0 0.81 521

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");