Base-pair collective (covariation) scores

7 rows where conformation = "tSS", molecule = "23S" and strength = "Strong" sorted by position_1

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Suggested facets: Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, YCons, DfDel

group_code 7

strength 1

  • Strong · 7 ✖

molecule 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
4005 4005 23S 14 265 427   v4 A:U tSS       Strong T 12 8 4 0.4 0.22 0.97 1.19 0.97 0.98 0.53 0.58 0.0 0.63 869
4006 4006 23S 14 265 427   v4 A:U tSS       Strong 3 6 2 0 0.0 0.07 0.0 0.07 0.97 0.98 1.81 1.89 0.0 0.82 515
4007 4007 23S 14 265 427   v4 A:U tSS       Strong B 1 1 0 0.0 0.0 0.0 0.0 0.97 0.98 1.94 1.87 0.0 0.85 277
4008 4008 23S 14 265 427   v4 A:U tSS       Strong A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.88 36
4009 4009 23S 14 265 427   v4 A:U tSS       Strong C 0 1 0 0.0 0.0 0.0 0.0 0.97 0.99 1.86 1.92 0.0 0.97 100
4010 4010 23S 14 265 427   v4 A:U tSS       Strong E 5 1 0 0.0 0.12 0.0 0.12 0.96 0.97 1.65 1.92 0.0 0.76 202
4011 4011 23S 14 265 427   v4 A:U tSS       Strong M 6 5 4 0.73 0.67 0.93 1.59 0.93 0.97 -0.46 -0.45 0.01 0.13 254

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");