Base-pair collective (covariation) scores

7 rows where conformation = "tSH", molecule = "16S" and strength = "Weak" sorted by position_1

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Suggested facets: Xch, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, DfDel

group_code 7

strength 1

  • Weak · 7 ✖

molecule 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1695 1695 16S 23 690 697   v4 G:U tSH       Weak T 103 33 7 0.1 0.28 0.87 1.15 0.12 0.94 1.05 1.41 0.0 0.84 7180
1696 1696 16S 23 690 697   v4 G:U tSH       Weak 3 22 5 0 0.0 0.0 0.0 0.0 0.08 1.0 1.58 1.97 0.0 0.85 6118
1697 1697 16S 23 690 697   v4 G:U tSH       Weak B 18 2 0 0.0 0.0 0.0 0.0 0.08 1.0 1.56 1.99 0.0 0.83 4853
1698 1698 16S 23 690 697   v4 G:U tSH       Weak A 2 0 0 0.0 0.0 0.0 0.0 0.34 1.0 1.07 2.0 0.0 0.88 233
1699 1699 16S 23 690 697   v4 G:U tSH       Weak C 3 1 0 0.0 0.06 0.0 0.06 0.1 0.99 1.45 1.95 0.01 0.92 169
1700 1700 16S 23 690 697   v4 G:U tSH       Weak E 2 3 0 0.0 0.0 0.0 0.0 0.01 0.99 1.96 1.89 0.0 0.98 1032
1701 1701 16S 23 690 697   v4 G:U tSH       Weak M 78 27 7 0.13 0.3 0.54 0.84 0.4 0.54 0.43 0.43 0.0 0.77 901

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");