Base-pair collective (covariation) scores

4 rows where conformation = "tSH", group_code = "M" and strength = "Strong" sorted by position_1

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Suggested facets: reference_base_pair, Xch, PE, PES, DfDel

strength 1

  • Strong · 4 ✖

molecule 1

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3724 3724 23S 7 82 104   v4 U:A tSH       Strong M 4 2 1 0.33 0.56 0.7 1.26 0.48 0.85 -0.56 -0.45 0.01 0.09 234
3934 3934 23S 11 195 200   v4 A:U tSH       Strong M 4 5 3 0.67 0.62 0.97 1.6 0.97 0.97 1.28 1.15 0.0 0.76 254
8106 8106 23S 78 2144 2147   v4 G:A tSH       Strong M 7 4 3 0.55 0.32 0.56 0.88 0.18 0.21 -0.53 -0.42 0.01 0.11 309
9205 9205 23S 97 2746 2758   v4 U:A tSH       Strong M 7 11 6 0.67 0.38 0.93 1.31 0.93 0.96 1.29 1.02 0.0 0.73 240

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");