Base-pair collective (covariation) scores

4 rows where conformation = "tSH", group_code = 3 and strength = "Strong" sorted by position_1

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Suggested facets: reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, DfDel, PNuc

strength 1

  • Strong · 4 ✖

molecule 1

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3719 3719 23S 7 82 104   v4 U:A tSH       Strong 3 16 21 5 0.27 0.51 0.79 1.29 0.07 0.67 -0.04 -0.57 0.12 0.47 413
3929 3929 23S 11 195 200   v4 A:U tSH       Strong 3 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.93 1.98 0.0 0.77 486
8101 8101 23S 78 2144 2147   v4 G:A tSH       Strong 3 18 16 10 0.59 0.72 0.91 1.63 0.08 0.31 0.32 0.4 0.01 0.63 438
9200 9200 23S 97 2746 2758   v4 U:A tSH       Strong 3 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.63 399

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");