Base-pair collective (covariation) scores

7 rows where conformation = "tHW", molecule = "16S" and strength = "Strong" sorted by position_1

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Suggested facets: PE, PES, Cov3, WC, WCGU, DfDel

group_code 7

strength 1

  • Strong · 7 ✖

molecule 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
526 526 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong T 98 108 48 0.47 0.41 0.88 1.29 0.01 0.09 0.53 0.41 0.0 0.73 7096
527 527 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong 3 95 103 47 0.47 0.42 0.88 1.3 0.01 0.09 1.15 1.02 0.0 0.85 6105
528 528 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong B 72 84 46 0.59 0.54 0.91 1.45 0.01 0.11 1.2 1.01 0.0 0.83 4869
529 529 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong A 7 13 1 0.1 0.24 0.6 0.85 0.01 0.01 1.33 0.73 0.0 0.81 215
530 530 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong C 2 5 1 0.29 0.14 0.0 0.14 0.04 0.04 1.73 1.32 0.01 0.91 168
531 531 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong E 16 6 0 0.0 0.07 0.0 0.07 0.01 0.01 1.26 1.66 0.0 0.96 1021
532 532 16S 8 152 169   v4 A:C tHW   3°: base pair   Strong M 1 0 0 0.0 0.0 0.0 0.0 0.0 0.0 -0.13 -0.07 0.0 0.0 832

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");