Base-pair collective (covariation) scores

2 rows where conformation = "tHS", group_code = "M" and strength = "Weak" sorted by position_1

✎ View and edit SQL

This data as json, CSV (advanced)

strength 1

  • Weak · 2 ✖

molecule 1

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
7154 7154 23S 65 1775 1789   v4 U:A tHS       Weak M 2 5 1 0.29 0.61 0.97 1.59 0.97 0.97 1.73 1.59 0.0 0.91 283
7245 7245 23S 66 1803 1814   v4 A:G tHS   3°: base pair   Weak M 3 8 3 0.55 0.22 0.66 0.88 0.17 0.19 -0.46 -0.57 0.06 0.17 283

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");