Base-pair collective (covariation) scores

2 rows where conformation = "tHS", group_code = "E" and strength = "Strong" sorted by position_1

✎ View and edit SQL

This data as json, CSV (advanced)

strength 1

  • Strong · 2 ✖

molecule 1

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
6754 6754 23S 59 1528 1543   v4 A:G tHS   3°: base pair   Strong E 6 9 6 0.8 0.94 0.98 1.92 0.98 0.99 0.05 0.14 0.01 0.63 180
6978 6978 23S 62 1690 1697   v4 A:G tHS   3°: base pair   Strong E 2 4 1 0.33 0.2 0.0 0.2 0.0 0.01 1.84 1.61 0.0 0.59 155

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");