Base-pair collective (covariation) scores
5 rows where conformation = "tHS", group_code = "B" and molecule = "23S" sorted by position_1
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Suggested facets: reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, WC, WCGU, XCons, YCons, PNuc
strength 3
- Strong 2
- Weak 2
- Significant 1
molecule 1
- 23S · 5 ✖
group_code 1
- B · 5 ✖
conformation 1
- tHS · 5 ✖
| Link | rowid | molecule | helix_number | position_1 ▼ | position_2 | pair_note | header_format | reference_base_pair | conformation | ai_code | tertiary_type | header_extra | strength | group_code | Xch | Ych | PE | PES | Cov1 | Cov3 | C1+C3 | WC | WCGU | XCons | YCons | DfDel | PNuc | Seq |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3587 | 3587 | 23S | 5 | 53 | 117 | v4 | A:G | tHS | 3°: base pair | Significant | B | 0 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 2.0 | 0.0 | 0.77 | 252 | |||
| 6751 | 6751 | 23S | 59 | 1528 | 1543 | v4 | A:G | tHS | 3°: base pair | Strong | B | 5 | 5 | 3 | 0.6 | 0.78 | 0.94 | 1.72 | 0.2 | 0.23 | 0.4 | 0.35 | 0.0 | 0.71 | 264 | |||
| 6975 | 6975 | 23S | 62 | 1690 | 1697 | v4 | A:G | tHS | 3°: base pair | Strong | B | 5 | 11 | 2 | 0.25 | 0.55 | 0.89 | 1.44 | 0.0 | 0.0 | 1.33 | 0.9 | 0.0 | 0.8 | 262 | |||
| 7150 | 7150 | 23S | 65 | 1775 | 1789 | v4 | U:A | tHS | Weak | B | 1 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.96 | 2.0 | 0.0 | 0.8 | 261 | ||||
| 7241 | 7241 | 23S | 66 | 1803 | 1814 | v4 | A:G | tHS | 3°: base pair | Weak | B | 0 | 3 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 1.85 | 0.0 | 0.79 | 259 |
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CREATE TABLE "basepair_collective_score" (
"molecule" TEXT,
"helix_number" TEXT,
"position_1" INTEGER,
"position_2" INTEGER,
"pair_note" TEXT,
"header_format" TEXT,
"reference_base_pair" TEXT,
"conformation" TEXT,
"ai_code" TEXT,
"tertiary_type" TEXT,
"header_extra" TEXT,
"strength" TEXT,
"group_code" TEXT,
"Xch" INTEGER,
"Ych" INTEGER,
"PE" INTEGER,
"PES" REAL,
"Cov1" REAL,
"Cov3" REAL,
"C1+C3" REAL,
"WC" REAL,
"WCGU" REAL,
"XCons" REAL,
"YCons" REAL,
"DfDel" REAL,
"PNuc" REAL,
"Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
ON "basepair_collective_score" ("molecule", "position_1", "position_2");