Base-pair collective (covariation) scores

7 rows where conformation = "tHS/tSH" and molecule = "23S" sorted by position_1

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Suggested facets: Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, PNuc

group_code 7

strength 1

molecule 1

conformation 1

  • tHS/tSH · 7 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
7400 7400 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong T 12 24 7 0.39 0.75 0.86 1.61 0.06 0.06 -0.63 -0.62 0.0 0.39 868
7401 7401 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong 3 4 5 3 0.67 0.95 0.98 1.93 0.01 0.01 -0.42 -0.39 0.0 0.41 456
7402 7402 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong B 4 5 3 0.67 0.95 0.98 1.93 0.01 0.01 0.95 1.05 0.0 0.79 260
7403 7403 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong A 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 41
7404 7404 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong C 0 13 0 0.0 0.0 0.0 0.0 0.03 0.03 2.0 1.06 0.0 0.98 101
7405 7405 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong E 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 155
7406 7406 23S 68 1858 1884   v4 A:G tHS/tSH   3°: base pair   Strong M 8 6 4 0.57 0.28 0.51 0.79 0.4 0.45 -0.59 -0.53 0.0 0.15 311

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");