Base-pair collective (covariation) scores

8 rows where conformation = "cWW", group_code = "M" and strength = "Significant" sorted by position_1

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Suggested facets: reference_base_pair, Xch, Ych, PE, PES, Cov3, WC, XCons, DfDel, Seq

strength 1

  • Significant · 8 ✖

molecule 1

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3654 3654 23S 6.1 64 90   v4 A:U cWW   3°: pseudoknot   Significant M 6 6 2 0.33 0.26 0.42 0.68 0.29 0.33 -0.57 -0.5 0.03 0.08 233
3990 3990 23S 13 239 258   v4 C:G cWW       Significant M 25 21 9 0.39 0.58 0.74 1.32 0.74 0.81 0.08 -0.01 0.02 0.73 254
4109 4109 23S 18 287 353   v4 G:C cWW       Significant M 1 3 0 0.0 0.11 0.0 0.11 0.47 0.53 -0.33 -0.33 0.0 0.05 254
5334 5334 23S 38 874 903   v4 G:C cWW       Significant M 6 3 2 0.44 0.62 0.74 1.36 0.74 0.86 -0.57 -0.57 0.04 0.14 266
5649 5649 23S 42 1035 1120   v4 U:G cWW       Significant M 9 10 5 0.53 0.31 0.62 0.93 0.42 0.92 -0.54 -0.64 0.01 0.15 276
6244 6244 23S 51 1348 1598   v4 C:A cWW   3°: base pair   Significant M 16 10 0 0.0 0.12 0.0 0.12 0.44 0.46 -0.83 -0.56 0.01 0.39 276
8022 8022 23S 77 2124 2174   v4 G:C cWW       Significant M 2 2 2 1.0 0.33 0.9 1.24 0.9 0.93 -0.38 -0.4 0.0 0.13 309
8547 8547 23S 88 2401 2415   v4 U:G cWW       Significant M 6 9 4 0.53 0.27 0.68 0.95 0.42 0.98 -0.49 -0.53 0.0 0.16 309

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");