Base-pair collective (covariation) scores

8 rows where conformation = "cWW", group_code = "E" and strength = "Significant" sorted by position_1

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Suggested facets: reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, DfDel, PNuc, Seq

strength 1

  • Significant · 8 ✖

molecule 1

group_code 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
3653 3653 23S 6.1 64 90   v4 A:U cWW   3°: pseudoknot   Significant E 4 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.04 -0.05 0.45 0.0 118
3989 3989 23S 13 239 258   v4 C:G cWW       Significant E 22 18 7 0.35 0.36 0.55 0.91 0.3 0.34 0.84 0.47 0.0 0.76 200
4108 4108 23S 18 287 353   v4 G:C cWW       Significant E 15 19 4 0.23 0.16 0.0 0.16 0.41 0.56 -0.32 -0.54 0.06 0.53 212
5333 5333 23S 38 874 903   v4 G:C cWW       Significant E 3 3 3 1.0 0.15 0.0 0.15 0.03 0.05 1.6 1.33 0.0 0.78 212
5648 5648 23S 42 1035 1120   v4 U:G cWW       Significant E 0 1 0 0.0 0.0 0.0 0.0 0.01 0.98 1.9 1.76 0.0 0.78 206
6243 6243 23S 51 1348 1598   v4 C:A cWW   3°: base pair   Significant E 1 11 0 0.0 0.0 0.0 0.0 0.6 0.6 -0.3 0.74 0.63 0.04 164
8021 8021 23S 77 2124 2174   v4 G:C cWW       Significant E 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.59 155
8546 8546 23S 88 2401 2415   v4 U:G cWW       Significant E 13 8 7 0.67 0.27 0.67 0.93 0.67 0.86 0.43 1.08 0.0 0.59 155

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");