Base-pair collective (covariation) scores

11 rows where conformation = "cWW", group_code = "C" and strength = "No Support" sorted by position_1

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Suggested facets: helix_number, reference_base_pair, tertiary_type, Xch, Ych, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, DfDel, PNuc, Seq

molecule 2

strength 1

  • No Support · 11 ✖

group_code 1

conformation 1

  • cWW · 11 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
1216 1216 16S 18 521 528   v4 G:C cWW   3°: pseudoknot   No Support C 0 1 0 0.0 0.0 0.0 0.0 0.99 0.99 1.95 2.0 0.0 0.93 170
4534 4534 23S 25.1 566 575   v4 U:A cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.97 100
2021 2021 16S 28 924 1392   v4 C:G cWW       No Support C 0 2 0 0.0 0.0 0.0 0.0 0.99 0.99 2.0 1.95 0.0 0.85 154
2238 2238 16S 31 963 972   v4 G:C cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.9 163
2504 2504 16S 34 1061 1195   v4 G:C cWW   3°: base pair   No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 1.94 0.01 0.89 162
6144 6144 23S 49.1 1310 1604   v4 G:C cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.97 100
7691 7691 23S 74 2064 2446   v4 C:G cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.96 99
7754 7754 23S 74 2074 2435   v4 U:A cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.96 99
8664 8664 23S 90 2508 2580   v4 G:U cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.94 97
8846 8846 23S 93 2591 2603   v4 C:G cWW       No Support C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.53 55
9385 9385 23S 101 2845 2871   v4 U:U cWW   3°: base pair   No Support C 4 3 0 0.0 0.59 0.76 1.35 0.76 0.94 0.53 0.75 0.0 0.48 50

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");