Base-pair collective (covariation) scores

7 rows where conformation = "cWS", molecule = "16S" and strength = "Strong" sorted by position_1

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Suggested facets: Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, DfDel, PNuc

group_code 7

strength 1

  • Strong · 7 ✖

molecule 1

conformation 1

Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
2290 2290 16S 33 996 1045   v4 A:C cWS       Strong T 29 37 15 0.46 0.07 0.0 0.07 0.03 0.03 0.19 0.62 0.0 0.0 6974
2291 2291 16S 33 996 1045   v4 A:C cWS       Strong 3 21 22 13 0.6 0.66 0.98 1.64 0.05 0.05 0.56 0.47 0.03 0.62 5664
2292 2292 16S 33 996 1045   v4 A:C cWS       Strong B 21 22 13 0.6 0.66 0.98 1.64 0.05 0.05 1.68 1.61 0.0 0.76 4429
2293 2293 16S 33 996 1045   v4 A:C cWS       Strong A 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 0.0 0.0 202
2294 2294 16S 33 996 1045   v4 A:C cWS       Strong C 1 2 0 0.0 0.0 0.0 0.0 0.02 0.02 1.56 1.71 0.02 0.86 162
2295 2295 16S 33 996 1045   v4 A:C cWS       Strong E 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -0.01 0.0 0.0 1029
2296 2296 16S 33 996 1045   v4 A:C cWS       Strong M 7 13 2 0.2 0.0 0.0 0.0 0.01 0.01 -0.39 1.35 0.0 0.0 1153

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");