Base-pair collective (covariation) scores

42 rows where conformation = "No BP", molecule = "23S" and strength = "Weak" sorted by position_1

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Suggested facets: helix_number, position_1, position_2, reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, WC, WCGU, XCons, YCons, DfDel, PNuc, Seq

group_code 7

strength 1

  • Weak · 42 ✖

molecule 1

  • 23S · 42 ✖

conformation 1

  • No BP · 42 ✖
Link rowid molecule helix_number position_1 ▼ position_2 pair_note header_format reference_base_pair conformation ai_code tertiary_type header_extra strength group_code Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
4824 4824 23S 33 687 775   v4 C:G No BP       Weak T 11 7 0 0.0 0.29 0.97 1.27 0.97 0.98 1.72 1.8 0.0 0.84 886
4825 4825 23S 33 687 775   v4 C:G No BP       Weak 3 2 1 0 0.0 0.0 0.0 0.0 0.99 0.99 1.96 1.94 0.0 0.83 524
4826 4826 23S 33 687 775   v4 C:G No BP       Weak B 0 1 0 0.0 0.0 0.0 0.0 0.99 0.99 2.0 1.93 0.0 0.86 282
4827 4827 23S 33 687 775   v4 C:G No BP       Weak A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.9 37
4828 4828 23S 33 687 775   v4 C:G No BP       Weak C 1 2 0 0.0 0.0 0.0 0.0 0.95 0.95 1.86 1.81 0.0 0.97 100
4829 4829 23S 33 687 775   v4 C:G No BP       Weak E 2 0 0 0.0 0.0 0.0 0.0 0.99 0.99 1.92 1.95 0.0 0.78 205
4830 4830 23S 33 687 775   v4 C:G No BP       Weak M 8 4 0 0.0 0.4 0.94 1.34 0.94 0.98 1.34 1.62 0.01 0.83 262
4929 4929 23S 34 703 729   v4 U:G No BP       Weak T 40 4 1 0.04 0.02 0.0 0.02 0.17 0.93 0.55 1.49 0.01 0.79 887
4930 4930 23S 34 703 729   v4 U:G No BP       Weak 3 20 0 0 0.0 0.01 0.0 0.01 0.23 1.0 1.23 1.98 0.0 0.83 524
4931 4931 23S 34 703 729   v4 U:G No BP       Weak B 1 0 0 0.0 0.0 0.0 0.0 0.02 1.0 1.87 2.0 0.0 0.86 282
4932 4932 23S 34 703 729   v4 U:G No BP       Weak A 3 0 0 0.0 0.0 0.0 0.0 0.32 1.0 1.09 2.0 0.0 0.9 37
4933 4933 23S 34 703 729   v4 U:G No BP       Weak C 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.97 100
4934 4934 23S 34 703 729   v4 U:G No BP       Weak E 16 0 0 0.0 0.01 0.0 0.01 0.49 0.99 1.0 1.96 0.0 0.78 205
4935 4935 23S 34 703 729   v4 U:G No BP       Weak M 20 4 1 0.08 0.04 0.0 0.04 0.09 0.73 -0.3 0.73 0.04 0.64 263
7225 7225 23S 66 1799 1820   v4 G:U No BP       Weak T 3 10 1 0.15 0.01 0.0 0.01 0.24 0.99 1.63 0.93 0.0 0.78 842
7226 7226 23S 66 1799 1820   v4 G:U No BP       Weak 3 0 4 0 0.0 0.01 0.0 0.01 0.41 1.0 1.83 0.9 0.0 0.72 458
7227 7227 23S 66 1799 1820   v4 G:U No BP       Weak B 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 0.8 262
7228 7228 23S 66 1799 1820   v4 G:U No BP       Weak A 0 2 0 0.0 0.0 0.0 0.0 0.9 1.0 2.0 1.54 0.0 1.0 41
7229 7229 23S 66 1799 1820   v4 G:U No BP       Weak C 0 3 0 0.0 0.0 0.0 0.0 0.01 0.97 2.0 1.73 0.0 0.98 101
7230 7230 23S 66 1799 1820   v4 G:U No BP       Weak E 0 2 0 0.0 0.0 0.0 0.0 0.99 0.99 1.82 1.78 0.0 0.58 155
7231 7231 23S 66 1799 1820   v4 G:U No BP       Weak M 3 3 1 0.33 0.12 0.0 0.12 0.03 1.0 1.27 1.37 0.0 0.83 283
7498 7498 23S 69 1911 1919   v4 U:A No BP       Weak T 2 0 0 0.0 0.0 0.0 0.0 0.99 0.99 1.82 1.86 0.0 0.8 852
7499 7499 23S 69 1911 1919   v4 U:A No BP       Weak 3 2 0 0 0.0 0.0 0.0 0.0 0.99 0.99 1.9 1.98 0.0 0.7 440
7500 7500 23S 69 1911 1919   v4 U:A No BP       Weak B 2 0 0 0.0 0.0 0.0 0.0 0.98 0.98 1.83 1.95 0.0 0.74 244
7501 7501 23S 69 1911 1919   v4 U:A No BP       Weak A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
7502 7502 23S 69 1911 1919   v4 U:A No BP       Weak C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.98 101
7503 7503 23S 69 1911 1919   v4 U:A No BP       Weak E 0 0 0 0.0 0.0 0.0 0.0 0.99 0.99 2.0 1.94 0.0 0.59 155
7504 7504 23S 69 1911 1919   v4 U:A No BP       Weak M 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 1.71 1.71 0.0 0.96 311
7757 7757 23S 74 2075 2434   v4 U:A No BP       Weak T 4 8 3 0.5 0.05 0.0 0.05 0.98 0.98 1.94 1.83 0.0 0.81 845
7758 7758 23S 74 2075 2434   v4 U:A No BP       Weak 3 0 1 0 0.0 0.0 0.0 0.0 0.99 0.99 2.0 1.94 0.0 0.69 437
7759 7759 23S 74 2075 2434   v4 U:A No BP       Weak B 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.74 241
7760 7760 23S 74 2075 2434   v4 U:A No BP       Weak A 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 1.0 41
7761 7761 23S 74 2075 2434   v4 U:A No BP       Weak C 0 0 0 0.0 0.0 0.0 0.0 1.0 1.0 2.0 2.0 0.0 0.96 99
7762 7762 23S 74 2075 2434   v4 U:A No BP       Weak E 0 1 0 0.0 0.0 0.0 0.0 0.98 0.98 2.0 1.86 0.0 0.59 155
7763 7763 23S 74 2075 2434   v4 U:A No BP       Weak M 4 7 3 0.55 0.06 0.0 0.06 0.95 0.96 1.85 1.67 0.0 0.99 309
8191 8191 23S 80 2249 2255   v4 U:G No BP       Weak T 2 10 1 0.17 0.11 0.0 0.11 0.04 0.99 1.91 1.68 0.0 0.81 845
8192 8192 23S 80 2249 2255   v4 U:G No BP       Weak 3 1 0 0 0.0 0.0 0.0 0.0 0.0 0.99 1.94 1.97 0.0 0.69 434
8193 8193 23S 80 2249 2255   v4 U:G No BP       Weak B 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 1.95 0.0 0.73 238
8194 8194 23S 80 2249 2255   v4 U:G No BP       Weak A 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 2.0 2.0 0.0 1.0 41
8195 8195 23S 80 2249 2255   v4 U:G No BP       Weak C 0 2 0 0.0 0.0 0.0 0.0 0.02 1.0 2.0 1.86 0.0 0.99 102
8196 8196 23S 80 2249 2255   v4 U:G No BP       Weak E 1 0 0 0.0 0.0 0.0 0.0 0.0 0.98 1.86 2.0 0.0 0.59 155
8197 8197 23S 80 2249 2255   v4 U:G No BP       Weak M 1 8 1 0.22 0.12 0.0 0.12 0.11 0.98 1.88 1.4 0.0 0.99 309

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CREATE TABLE "basepair_collective_score" (
   "molecule" TEXT,
   "helix_number" TEXT,
   "position_1" INTEGER,
   "position_2" INTEGER,
   "pair_note" TEXT,
   "header_format" TEXT,
   "reference_base_pair" TEXT,
   "conformation" TEXT,
   "ai_code" TEXT,
   "tertiary_type" TEXT,
   "header_extra" TEXT,
   "strength" TEXT,
   "group_code" TEXT,
   "Xch" INTEGER,
   "Ych" INTEGER,
   "PE" INTEGER,
   "PES" REAL,
   "Cov1" REAL,
   "Cov3" REAL,
   "C1+C3" REAL,
   "WC" REAL,
   "WCGU" REAL,
   "XCons" REAL,
   "YCons" REAL,
   "DfDel" REAL,
   "PNuc" REAL,
   "Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
    ON "basepair_collective_score" ("molecule", "position_1", "position_2");