Base-pair collective (covariation) scores
15 rows where conformation = "No BP", group_code = "T" and strength = "Weak" sorted by position_1
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Suggested facets: helix_number, reference_base_pair, Xch, Ych, PE, PES, Cov1, Cov3, C1+C3, WC, WCGU, XCons, YCons, DfDel, PNuc, Seq
| Link | rowid | molecule | helix_number | position_1 ▼ | position_2 | pair_note | header_format | reference_base_pair | conformation | ai_code | tertiary_type | header_extra | strength | group_code | Xch | Ych | PE | PES | Cov1 | Cov3 | C1+C3 | WC | WCGU | XCons | YCons | DfDel | PNuc | Seq |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29 | 29 | 16S | 1 | 13 | 21 | v4 | U:G | No BP | Weak | T | 14 | 68 | 3 | 0.07 | 0.02 | 0.0 | 0.02 | 0.09 | 0.98 | 1.8 | 1.5 | 0.0 | 0.46 | 3890 | ||||
| 911 | 911 | 16S | 15 | 375 | 388 | v4 | U:G | No BP | Weak | T | 10 | 30 | 4 | 0.2 | 0.05 | 0.0 | 0.05 | 0.01 | 0.99 | 1.94 | 1.68 | 0.02 | 0.8 | 6852 | ||||
| 1443 | 1443 | 16S | 21 | 606 | 632 | v4 | G:U | No BP | Weak | T | 89 | 148 | 18 | 0.15 | 0.15 | 0.0 | 0.15 | 0.09 | 0.78 | -0.06 | -0.3 | 0.01 | 0.61 | 7251 | ||||
| 4824 | 4824 | 23S | 33 | 687 | 775 | v4 | C:G | No BP | Weak | T | 11 | 7 | 0 | 0.0 | 0.29 | 0.97 | 1.27 | 0.97 | 0.98 | 1.72 | 1.8 | 0.0 | 0.84 | 886 | ||||
| 4929 | 4929 | 23S | 34 | 703 | 729 | v4 | U:G | No BP | Weak | T | 40 | 4 | 1 | 0.04 | 0.02 | 0.0 | 0.02 | 0.17 | 0.93 | 0.55 | 1.49 | 0.01 | 0.79 | 887 | ||||
| 2213 | 2213 | 16S | 31 | 960 | 975 | v4 | U:A | No BP | Weak | T | 10 | 32 | 1 | 0.05 | 0.39 | 0.77 | 1.16 | 0.77 | 0.99 | 1.35 | 0.64 | 0.0 | 0.81 | 6871 | ||||
| 2220 | 2220 | 16S | 31 | 961 | 974 | v4 | U:A | No BP | Weak | T | 48 | 99 | 4 | 0.05 | 0.07 | 0.0 | 0.07 | 0.67 | 0.84 | 1.73 | 0.59 | 0.0 | 0.8 | 6856 | ||||
| 2458 | 2458 | 16S | 34 | 1053 | 1205 | v4 | G:U | No BP | Weak | T | 7 | 20 | 0 | 0.0 | 0.01 | 0.0 | 0.01 | 0.18 | 1.0 | 1.35 | 1.79 | 0.0 | 0.81 | 6891 | ||||
| 2731 | 2731 | 16S | 40 | 1158 | 1178 | v4 | C:G | No BP | Weak | T | 12 | 156 | 4 | 0.05 | 0.13 | 0.0 | 0.13 | 0.96 | 0.97 | 0.97 | 1.02 | 0.12 | 0.71 | 7138 | ||||
| 2738 | 2738 | 16S | 40 | 1159 | 1177 | v4 | U:G | No BP | Weak | T | 80 | 167 | 11 | 0.09 | 0.16 | 0.0 | 0.16 | 0.07 | 0.94 | 0.49 | 1.0 | 0.12 | 0.71 | 7135 | ||||
| 3277 | 3277 | 16S | 45 | 1506 | 1529 | v4 | U:G | No BP | Weak | T | 7 | 19 | 0 | 0.0 | 0.01 | 0.0 | 0.01 | 0.05 | 0.99 | 1.9 | 1.58 | 0.0 | 0.26 | 2260 | ||||
| 7225 | 7225 | 23S | 66 | 1799 | 1820 | v4 | G:U | No BP | Weak | T | 3 | 10 | 1 | 0.15 | 0.01 | 0.0 | 0.01 | 0.24 | 0.99 | 1.63 | 0.93 | 0.0 | 0.78 | 842 | ||||
| 7498 | 7498 | 23S | 69 | 1911 | 1919 | v4 | U:A | No BP | Weak | T | 2 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.99 | 0.99 | 1.82 | 1.86 | 0.0 | 0.8 | 852 | ||||
| 7757 | 7757 | 23S | 74 | 2075 | 2434 | v4 | U:A | No BP | Weak | T | 4 | 8 | 3 | 0.5 | 0.05 | 0.0 | 0.05 | 0.98 | 0.98 | 1.94 | 1.83 | 0.0 | 0.81 | 845 | ||||
| 8191 | 8191 | 23S | 80 | 2249 | 2255 | v4 | U:G | No BP | Weak | T | 2 | 10 | 1 | 0.17 | 0.11 | 0.0 | 0.11 | 0.04 | 0.99 | 1.91 | 1.68 | 0.0 | 0.81 | 845 |
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CREATE TABLE "basepair_collective_score" (
"molecule" TEXT,
"helix_number" TEXT,
"position_1" INTEGER,
"position_2" INTEGER,
"pair_note" TEXT,
"header_format" TEXT,
"reference_base_pair" TEXT,
"conformation" TEXT,
"ai_code" TEXT,
"tertiary_type" TEXT,
"header_extra" TEXT,
"strength" TEXT,
"group_code" TEXT,
"Xch" INTEGER,
"Ych" INTEGER,
"PE" INTEGER,
"PES" REAL,
"Cov1" REAL,
"Cov3" REAL,
"C1+C3" REAL,
"WC" REAL,
"WCGU" REAL,
"XCons" REAL,
"YCons" REAL,
"DfDel" REAL,
"PNuc" REAL,
"Seq" INTEGER
);
CREATE INDEX "idx_basepair_collective_score_molecule_position_1_position_2"
ON "basepair_collective_score" ("molecule", "position_1", "position_2");